e_gw.25.39.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.25.39.1 T138089_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.25.39.1 C2H2 ZF 3 25
e_gw.25.39.1 C2H2 ZF 30 52
e_gw.25.39.1 C2H2 ZF 58 80
e_gw.25.39.1 C2H2 ZF 94 116
e_gw.25.39.1 C2H2 ZF 122 144
e_gw.25.39.1 C2H2 ZF 150 172
e_gw.25.39.1 C2H2 ZF 203 225
e_gw.25.39.1 C2H2 ZF 231 253
e_gw.25.39.1 C2H2 ZF 308 330
e_gw.25.39.1 C2H2 ZF 336 358
e_gw.25.39.1 C2H2 ZF 396 418
e_gw.25.39.1 C2H2 ZF 424 446
e_gw.25.39.1 C2H2 ZF 452 474
e_gw.25.39.1 C2H2 ZF 482 502
e_gw.25.39.1 C2H2 ZF 536 558
e_gw.25.39.1 C2H2 ZF 600 622
e_gw.25.39.1 C2H2 ZF 628 651

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I
ASU_01867 Ascaris suum ASU_01867 I
Bm1750 Brugia malayi Bm1750 I
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I
CapteG36721 Capitella teleta CapteG36721 I
CBN11281 Caenorhabditis brenneri CBN11281 I
CGI_10007380 Crassostrea gigas CGI_10007380 I
CJA13327 Caenorhabditis japonica CJA13327 I
CRE17301 Caenorhabditis remanei CRE17301 I
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I
HCOI02168200 Haemonchus contortus HCOI02168200 I
hlh-1 Caenorhabditis elegans WBGene00001948 D
LDEC009949 Leptinotarsa decemlineata LDEC009949 I
LOAG_16988 Loa loa LOAG_16988 I
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I
NECAME_14163 Necator americanus NECAME_14163 I
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I
Ppa-hlh-1 Pristionchus pacificus PPA08246 I
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I
SMUV_0000995901 Syphacia muris SMUV_0000995901 I
TC015855 Tribolium castaneum TC015855 I
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I
WBGene00247572 Onchocerca volvulus WBGene00247572 I
WUBG_05117 Wuchereria bancrofti WUBG_05117 I
YQE_11476 Dendroctonus ponderosae YQE_11476 I