Gorai.012G006900 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.012G006900 T143080_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.802 0.848
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.798 0.935
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.798 0.935
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.786 0.761
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.786 0.761
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.717
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.739
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G006900.1 C2H2 ZF 113 135
Gorai.012G006900.1 C2H2 ZF 172 194

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I
1735_Multiple Saccharomyces paradoxus 1735_Multiple I
21954_YPL089C Saccharomyces mikatae 21954_YPL089C I
25226_YPL089C Saccharomyces bayanus 25226_YPL089C I
572_YBR182C Saccharomyces mikatae 572_YBR182C I
A1O1_05243 Capronia coronata A1O1_05243 I
A1O3_09529 Capronia epimyces A1O3_09529 I
A1O5_02336 Cladophialophora psammophila A1O5_02336 I
A1O7_07076 Cladophialophora yegresii A1O7_07076 I
A1O9_04901 Exophiala aquamarina A1O9_04901 I
AAEL008720 Aedes aegypti AAEL008720 I
AALB009948 Anopheles albimanus AALB009948 I
Aan_R005414 Calypte anna Aan_R005414 I
AARA006325 Anopheles arabiensis AARA006325 I
AATE011966 Anopheles atroparvus AATE011966 I
AB03118.1 Alternaria brassicicola AB03118.1 I
ACHR000964 Anopheles christyi ACHR000964 I
ACLA_036490 Aspergillus clavatus CADACLAG00003970 I
ACOM041693 Anopheles coluzzii ACOM041693 I
ACUA004576 Anopheles culicifacies ACUA004576 I
ADAC008363 Anopheles darlingi ADAC008363 I
ADIR000346 Anopheles dirus ADIR000346 I
AEPI007010 Anopheles epiroticus AEPI007010 I
AFAF013563 Anopheles farauti AFAF013563 I
Afo_R000461 Aptenodytes forsteri Afo_R000461 I
AFUA_3G08520 Aspergillus fumigatus CADAFUAG00005633 I
AFUN006147 Anopheles funestus AFUN006147 I
AGABI2DRAFT_192991 Agaricus bisporus AGABI2DRAFT_192991 N
AGAP010512 Anopheles gambiae AGAP010512 I
AGOS_AGR198C Ashbya gossypii AGOS_AGR198C I
AMIN001258 Anopheles minimus AMIN001258 I
ANCDUO_04431 Ancylostoma duodenale ANCDUO_04431 I
ANIA_02984 Aspergillus nidulans CADANIAG00010096 I
AOL_s00078g125 Arthrobotrys oligospora AOL_s00078g125 N
AQUA001308 Anopheles quadriannulatus AQUA001308 I
ARB_05322 Arthroderma benhamiae ARB_05322 I
ASIS007770 Anopheles sinensis ASIS007770 I
ASTEI07120 Anopheles stephensi ASTEI07120 I
ATEG_01619 Aspergillus terreus CADATEAG00002690 I
AUEXF2481DRAFT_43803 Aureobasidium subglaciale AUEXF2481DRAFT_43803 I
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I
BAUCODRAFT_25460 Baudoinia compniacensis BAUCODRAFT_25460 I
BGIBMGA001384 Bombyx mori BGIBMGA001384 I
BOTBODRAFT_121202 Botryobasidium botryosum BOTBODRAFT_121202 I
Brh_R011000 Buceros rhinoceros Brh_R011000 I
BXY_0217000 Bursaphelenchus xylophilus BXY_0217000 I
CADAFLAG00001438 Aspergillus flavus CADAFLAG00001438 I
CADANGAG00002744 Aspergillus niger CADANGAG00002744 I
CADAORAG00003304 Aspergillus oryzae CADAORAG00003304 I
CAGL0H05621g Candida glabrata CAGL0H05621g I
CANTEDRAFT_125008 Candida tenuis CANTEDRAFT_125008 I
CaO19.12132 Candida albicans CaO19.12132 I
CaO19.4662 Candida albicans CaO19.4662 I
CD36_41250 Candida dubliniensis CD36_41250 I
CERSUDRAFT_112805 Ceriporiopsis subvermispora CERSUDRAFT_112805 N
CHGG_01378 Chaetomium globosum CHGG_01378 N
CIMG_07638 Coccidioides immitis CIMG_07638 I
CLEC013390 Cimex lectularius CLEC013390 I
CLUG_04340 Candida lusitaniae CLUG_04340 I
CLUG_04340 Clavispora lusitaniae CLUG_04340 I
Cmyd_10009988 Chelonia mydas Cmyd_10009988 I
CPAG_01728 Candida parapsilosis CPAG_01728 I
CPC735_043100 Coccidioides posadasii CPC735_043100 I
CPIJ008335 Culex quinquefasciatus CPIJ008335 I
CpipJ_CPIJ008335 Culex pipiens CpipJ_CPIJ008335 I
CTRG_00027 Candida tropicalis CTRG_00027 I
CY34DRAFT_134098 Suillus luteus CY34DRAFT_134098 N
DACRYDRAFT_49314 Dacryopinax sp DACRYDRAFT_49314 N
DEHA2B02882g Debaryomyces hansenii DEHA2B02882g I
DRE_05946 Drechslerella stenobrocha DRE_05946 N
Ecym_7060 Eremothecium cymbalariae Ecym_7060 I
ENSFALG00000000878 Ficedula albicollis ENSFALG00000000878 I
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I
ENSMLUG00000008828 Myotis lucifugus ENSMLUG00000008828 I
ENSOARG00000005757 Ovis aries ENSOARG00000005757 I
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I
ENSP00000265354 Macaca fascicularis ENSP00000265354 I
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I
estExt_fgenesh1_pm.C_110082 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_110082 I
estExt_fgenesh1_pm.C_30002 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_30002 I
estExt_fgeneshMC_pg.C_20010 Mucor circinelloides estExt_fgeneshMC_pg.C_20010 I
estExt_Genewise1.C_41737 Cryphonectria parasitica estExt_Genewise1.C_41737 I
estExt_genewise1_human.C_chr_1.10329 Pichia stipitis estExt_genewise1_human.C_chr_1.10329 I
EURHEDRAFT_408541 Aspergillus ruber EURHEDRAFT_408541 I
e_gw1.10.299.1 Sporobolomyces roseus e_gw1.10.299.1 N
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I
fgenesh1_pm.00866_#_723 Aspergillus carbonarius fgenesh1_pm.00866_#_723 I
G210_1171 Candida maltosa G210_1171 I
G647_03030 Cladophialophora carrionii G647_03030 I
GALMADRAFT_1298303 Galerina marginata GALMADRAFT_1298303 N
GALMADRAFT_143289 Galerina marginata GALMADRAFT_143289 N
GALMADRAFT_75179 Galerina marginata GALMADRAFT_75179 N
GALMADRAFT_91917 Galerina marginata GALMADRAFT_91917 N
Gfo_R009695 Geospiza fortis Gfo_R009695 I
GNLVRS01_PISO0M22936g Millerozyma farinosa GNLVRS01_PISO0M22936g I
GNLVRS01_PISO0N23201g Millerozyma farinosa GNLVRS01_PISO0N23201g I
GYMLUDRAFT_115352 Gymnopus luxurians GYMLUDRAFT_115352 N
H072_1342 Dactylellina haptotyla H072_1342 N
H101_08129 Trichophyton interdigitale H101_08129 I
H102_05233 Trichophyton rubrum H102_05233 I
H105_05252 Trichophyton soudanense H105_05252 I
Hba_21368 Heterorhabditis bacteriophora Hba_21368 I
HETIRDRAFT_459848 Heterobasidion irregulare HETIRDRAFT_459848 N
HHAL001485-PA Halyomorpha halys HHAL001485-PA I
HMEL017830 Heliconius melpomene HMEL017830 I
HMPREF1120_02025 Exophiala dermatitidis HMPREF1120_02025 I
HPLM_0000743501 Haemonchus placei HPLM_0000743501 I
HPODL_00493 Ogataea parapolymorpha HPODL_00493 I
J056_002827 Wallemia ichthyophaga J056_002827 I
J056_003833 Wallemia ichthyophaga J056_003833 N
JAAARDRAFT_30535 Jaapia argillacea JAAARDRAFT_30535 N
JL09_g2233 Pichia kudriavzevii JL09_g2233 I
K443DRAFT_361864 Laccaria amethystina K443DRAFT_361864 N
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I
KAFR_0I00730 Kazachstania africana KAFR_0I00730 I
Kpol_1048p48 Vanderwaltozyma polyspora Kpol_1048p48 I
KUCA_T00000739001 Kuraishia capsulata KUCA_T00000739001 I
LCUP011663 Lucilia cuprina LCUP011663 I
LLOJ005985 Lutzomyia longipalpis LLOJ005985 I
M378DRAFT_55133 Amanita muscaria M378DRAFT_55133 N
M404DRAFT_388312 Pisolithus tinctorius M404DRAFT_388312 N
M407DRAFT_240766 Tulasnella calospora M407DRAFT_240766 N
M422DRAFT_782754 Sphaerobolus stellatus M422DRAFT_782754 N
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I
M7I_1656 Glarea lozoyensis M7I_1656 I
MAM_07626 Metarhizium album MAM_07626 N
MCINX015635 Melitaea cinxia MCINX015635 I
MCYG_04979 Microsporum canis MCYG_04979 I
MCYG_04979 Arthroderma otae MCYG_04979 I
MESCA001358 Megaselia scalaris MESCA001358 I
MGYG_07902 Microsporum gypseum MGYG_07902 I
Moror_4352 Moniliophthora roreri Moror_4352 N
MPER_07979 Moniliophthora perniciosa MPER_07979 N
MVLG_02620 Microbotryum violaceum MVLG_02620 N
MYCFIDRAFT_72135 Pseudocercospora fijiensis MYCFIDRAFT_72135 I
Mycgr3G71585 Zymoseptoria tritici Mycgr3G71585 I
MYCTH_2295245 Myceliophthora thermophila MYCTH_2295245 N
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I
NCER_102270 Nosema ceranae NCER_102270 I
NDAI_0E02700 Naumovozyma dairenensis NDAI_0E02700 I
NFIA_068610 Neosartorya fischeri CADNFIAG00006321 I
O9G_005180 Rozella allomycis O9G_005180 I
Ogr17973 Ophisaurus gracilis Ogr17973 I
PAAG_00645 Paracoccidioides sp lutzii PAAG_00645 I
PABG_01574 Paracoccidioides brasiliensis PABG_01574 I
PaG_01229 Pseudozyma aphidis PaG_01229 N
PAN0_017d5513 Pseudozyma antarctica PAN0_017d5513 N
Pc20g03270 Penicillium chrysogenum Pc20g03270 I
PFL1_05358 Pseudozyma flocculosa PFL1_05358 N
PGUG_02571 Candida guilliermondii PGUG_02571 I
PGUG_02571 Meyerozyma guilliermondii PGUG_02571 I
PHACADRAFT_58963 Phanerochaete carnosa PHACADRAFT_58963 N
PHLGIDRAFT_36660 Phlebiopsis gigantea PHLGIDRAFT_36660 N
PHSY_005512 Pseudozyma hubeiensis PHSY_005512 N
PICST_68747 Scheffersomyces stipitis PICST_68747 I
PIIN_03660 Piriformospora indica PIIN_03660 N
PILCRDRAFT_571433 Piloderma croceum PILCRDRAFT_571433 N
PILCRDRAFT_603306 Piloderma croceum PILCRDRAFT_603306 N
PISMIDRAFT_680570 Pisolithus microcarpus PISMIDRAFT_680570 N
PITC_001660 Penicillium italicum PITC_001660 I
PLEOSDRAFT_1033113 Pleurotus ostreatus PLEOSDRAFT_1033113 N
PMAA_013140 Talaromyces marneffei PMAA_013140 I
PMAA_013140 Penicillium marneffei PMAA_013140 I
PODANS_1_6600 Podospora anserina PODANS_1_6600 I
PSEUBRA_SCAF21g03395 Pseudozyma brasiliensis PSEUBRA_SCAF21g03395 N
PTRG_08080 Pyrenophora triticirepentis PTRG_08080 I
PTT_15886 Pyrenophora teres PTT_15886 I
PV04_07501 Capronia semiimmersa PV04_07501 I
PV05_05426 Exophiala xenobiotica PV05_05426 I
PV06_00786 Exophiala oligosperma PV06_00786 I
PV07_11277 Cladophialophora immunda PV07_11277 I
PV08_00691 Exophiala spinifera PV08_00691 I
PV09_04800 Verruconis gallopava PV09_04800 I
PV10_07771 Exophiala mesophila PV10_07771 I
PV11_00659 Exophiala sideris PV11_00659 I
PVAR5_5878 Byssochlamys spectabilis PVAR5_5878 I
RHTO_02226 Rhodosporidium toruloides RHTO_02226 N
RLM1 Saccharomyces cerevisiae YPL089C D
RO3G_03857 Rhizopus oryzae RO3G_03857 I
RO3G_07165 Rhizopus oryzae RO3G_07165 I
RO3G_15773 Rhizopus oryzae RO3G_15773 I
RTG_02132 Rhodotorula glutinis RTG_02132 N
S40288_07194 Stachybotrys chartarum S40288_07194 I
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I
SAPIO_CDS1437 Scedosporium apiospermum SAPIO_CDS1437 I
SBOR_4659 Sclerotinia borealis SBOR_4659 I
Scas_Contig664.4 Saccharomyces castellii Scas_Contig664.4 I
SCHCODRAFT_258818 Schizophyllum commune SCHCODRAFT_258818 N
SCHCODRAFT_81364 Schizophyllum commune SCHCODRAFT_81364 N
SCLCIDRAFT_969057 Scleroderma citrinum SCLCIDRAFT_969057 N
SEPMUDRAFT_148874 Sphaerulina musiva SEPMUDRAFT_148874 I
SERLA73DRAFT_185178 Serpula lacrymans SERLA73DRAFT_185178 N
SETTUDRAFT_183592 Setosphaeria turcica SETTUDRAFT_183592 I
SINV23954 Solenopsis invicta SINV23954 I
SKUD_178506 Saccharomyces kudriavzevii SKUD_178506 I
SKUD_205813 Saccharomyces kudriavzevii SKUD_205813 I
SMP1 Saccharomyces cerevisiae YBR182C D
SNOG_07763 Stagonospora nodorum SNOG_07763 I
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I
SNOG_15194 Phaeosphaeria nodorum SNOG_15194 N
sr10083 Sporisorium reilianum sr10083 N
SRF Cavia porcellus ENSCPOG00000022327 I
SRF Erinaceus europaeus ENSEEUG00000005614 I
SRF Gorilla gorilla ENSGGOG00000006293 I
SRF Loxodonta africana ENSLAFG00000010278 I
SRF Sorex araneus ENSSARG00000003401 I
SRF Taeniopygia guttata ENSTGUG00000004738 I
SRF Vicugna pacos ENSVPAG00000008912 I
SU7_0243 Saccharomyces arboricola SU7_0243 I
SU7_3566 Saccharomyces arboricola SU7_3566 I
TBLA_0H03770 Tetrapisispora blattae TBLA_0H03770 I
TELCIR_03792 Teladorsagia circumcincta TELCIR_03792 I
TELCIR_12851 Teladorsagia circumcincta TELCIR_12851 I
TEQG_02757 Trichophyton equinum TEQG_02757 I
TESG_06676 Trichophyton tonsurans TESG_06676 I
TPHA_0A01340 Tetrapisispora phaffii TPHA_0A01340 I
TRIATDRAFT_288492 Trichoderma atroviride TRIATDRAFT_288492 I
TRIREDRAFT_68097 Trichoderma reesei TRIREDRAFT_68097 I
TRV_06898 Trichophyton verrucosum TRV_06898 I
TSTA_004010 Talaromyces stipitatus TSTA_004010 I
U727_00434011531 Penicillium solitum U727_00434011531 I
UCREL1_8460 Eutypa lata UCREL1_8460 I
UCRNP2_3485 Neofusicoccum parvum UCRNP2_3485 I
UCRPA7_1246 Togninia minima UCRPA7_1246 I
UHOR_08137 Ustilago hordei UHOR_08137 N
UM05323 Ustilago maydis UM05323 N
UREG_07644 Uncinocarpus reesii UREG_07644 I
V565_186740 Rhizoctonia solani V565_186740 I
VDBG_03707 Verticillium albo atrum VDBG_03707 N
VDBG_03707 Verticillium alfalfae VDBG_03707 N
W97_01089 Coniosporium apollinis W97_01089 I
WALSEDRAFT_59614 Wallemia sebi WALSEDRAFT_59614 N
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I
YALI0_F18788g Yarrowia lipolytica YALI0_F18788g I
Z517_02667 Fonsecaea pedrosoi Z517_02667 I
Z518_09438 Rhinocladiella mackenziei Z518_09438 I
Z519_11638 Cladophialophora bantiana Z519_11638 I