Rbpj (Rattus norvegicus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSRNOG00000007797 T166122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.931 0.931
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.931 0.931
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.931 0.931
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.931 0.931
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.931 0.931
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.931 0.931
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.931 0.931
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.931 0.931
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.931 0.931
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.931 0.931
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.931 0.931
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.931 0.931
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.931 0.931
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.746 0.746
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000010277 CSL 39 169

Links

Other CSL family TFs
Other Rattus norvegicus TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB05479 Xenopus laevis AAB05479 I 0.916
AAEL006419 Aedes aegypti AAEL006419 I 0.715
AALB007981 Anopheles albimanus AALB007981 I 0.708
Aan_R011115 Calypte anna Aan_R011115 I 0.916
AATE009298 Anopheles atroparvus AATE009298 I 0.700
ACEP17167 Atta cephalotes ACEP17167 I 0.731
ACOM040639 Anopheles coluzzii ACOM040639 I 0.702
ACUA014515 Anopheles culicifacies ACUA014515 I 0.702
ADIR011431 Anopheles dirus ADIR011431 I 0.702
AFAF012186 Anopheles farauti AFAF012186 I 0.702
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.916
AFUN007280 Anopheles funestus AFUN007280 I 0.702
AGAP008935 Anopheles gambiae AGAP008935 I 0.702
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.931
AMEM004324 Anopheles merus AMEM004324 I 0.702
AMIN005880 Anopheles minimus AMIN005880 I 0.702
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.702
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.700
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.731
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.916
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
CapteG179039 Capitella teleta CapteG179039 I 0.733
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.731
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.779
CLEC005205 Cimex lectularius CLEC005205 I 0.723
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.931
D915_08967 Fasciola hepatica D915_08967 I 0.833
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.746
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.931
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.885
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.846
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.916
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.931
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.916
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.837
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.852
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.931
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.931
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.931
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.931
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.931
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.823
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.901
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.762
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.931
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.931
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.893
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.775
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.931
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.840
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.931
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.923
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.931
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.931
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.944
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.893
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.791
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.771
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.779
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.746
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.746
GB45655 Apis mellifera GB45655 I 0.731
GE20814 Drosophila yakuba FBgn0238107 I 0.746
GF14905 Drosophila ananassae FBgn0091930 I 0.746
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.916
GG25142 Drosophila erecta FBgn0117267 I 0.746
GH10915 Drosophila grimshawi FBgn0118396 I 0.746
GI13259 Drosophila mojavensis FBgn0136016 I 0.754
GJ11880 Drosophila virilis FBgn0199134 I 0.746
GL26026 Drosophila persimilis FBgn0163608 I 0.746
GM15894 Drosophila sechellia FBgn0170810 I 0.746
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.708
HMEL017244 Heliconius melpomene HMEL017244 I 0.738
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.723
ISCW010197 Ixodes scapularis ISCW010197 I 0.738
KGM_08407 Danaus plexippus KGM_08407 I 0.738
L798_15068 Zootermopsis nevadensis L798_15068 I 0.731
LCUP003485 Lucilia cuprina LCUP003485 I 0.733
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.738
LotgiG159505 Lottia gigantea LotgiG159505 I 0.738
MDOA002342 Musca domestica MDOA002342 I 0.733
MESCA005881 Megaselia scalaris MESCA005881 I 0.720
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.931
NECAME_17145 Necator americanus NECAME_17145 I 0.714
NV17858 Nasonia vitripennis NV17858 I 0.754
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.786
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.907
PHUM462870 Pediculus humanus PHUM462870 I 0.723
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.931
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.931
RBPJ Bos taurus ENSBTAG00000003602 I 0.931
RBPJ Canis familiaris ENSCAFG00000016387 I 0.931
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.931
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.931
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.898
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.931
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.931
RBPJ Equus caballus ENSECAG00000019257 I 0.931
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.931
RBPJ Felis catus ENSFCAG00000030363 I 0.946
RBPJ Homo sapiens ENSG00000168214 D 1.000
RBPJ Gallus gallus ENSGALG00000014365 I 0.916
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.931
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.931
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.900
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.931
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.931
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.923
Rbpj Mus musculus ENSMUSG00000039191 D 0.931
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.931
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.931
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.931
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.931
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.931
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.931
RBPJ Sorex araneus ENSSARG00000001169 I 0.931
RBPJ Sus scrofa ENSSSCG00000022155 I 0.931
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.931
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.916
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.901
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.908
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.931
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.890
rbpj Xenopus tropicalis XB-GENE-490756 I 0.931
rbpj.S Xenopus laevis XB-GENE-865998 I 0.916
rbpja Danio rerio ENSDARG00000003398 I 0.862
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.837
rbpja Oryzias latipes ENSORLG00000004882 I 0.798
rbpjb Danio rerio ENSDARG00000052091 I 0.900
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.785
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.714
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.833
SINV15808 Solenopsis invicta SINV15808 I 0.731
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.833
SMAR001432 Strigamia maritima SMAR001432 I 0.762
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.833
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.833
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.727
Su(H) Drosophila melanogaster FBgn0004837 D 0.746
Su(H) Drosophila simulans FBgn0027417 I 0.746
Tal_R001466 Tyto alba Tal_R001466 I 0.916
TC014468 Tribolium castaneum TC014468 I 0.738
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.752
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.752
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.738
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.833
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.731