GH10915 (Drosophila grimshawi)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 FBgn0118396 T166151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		1.000 1.000
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		1.000 1.000
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.794 0.794
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.794 0.794
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.794 0.794
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.794 0.794
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.794 0.794
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.794 0.794
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.794 0.794
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.794 0.794
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.794 0.794
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.794 0.794
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.794 0.794
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0144821 CSL 132 262

Links

Other CSL family TFs
Other Drosophila grimshawi TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra034866 Brassica rapa Bra034866 I 0.000
Ca_00394 Cicer arietinum Ca_00394 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.000
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.000
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.000
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.000
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.000
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.000
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.000
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.000
Solyc07g055100.2 Solanum lycopersicum Solyc07g055100.2 N 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
TCM_029695 Theobroma cacao TCM_029695 I 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000