CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016654m.g
(
Citrus clementina
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Ciclev10016654m.g
T181296_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016654m
FAR1
47
136
VFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVA
Ciclev10016948m
FAR1
47
136
VFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVA
Links
Other
FAR1
family TFs
Other
Citrus clementina
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
ANCCEY_13226
Ancylostoma ceylanicum
ANCCEY_13226
I
CBG09567
Caenorhabditis briggsae
CBG09567
I
CBN01168
Caenorhabditis brenneri
CBN01168
I
CJA03481
Caenorhabditis japonica
CJA03481
I
CRE08690
Caenorhabditis remanei
CRE08690
I
CRE08760
Caenorhabditis remanei
CRE08760
I
CRE30948
Caenorhabditis remanei
CRE30948
I
HCOI00483700
Haemonchus contortus
HCOI00483700
I
HPLM_0000277901
Haemonchus placei
HPLM_0000277901
I
MhA1_Contig1462.frz3.gene15
Meloidogyne hapla
MhA1_Contig1462.frz3.gene15
I
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
nhr-130
Caenorhabditis elegans
WBGene00003720
I
nhr-232
Caenorhabditis elegans
WBGene00012494
D
PEQ_0000560101
Parascaris equorum
PEQ_0000560101
I
SVUK_0002058501
Strongylus vulgaris
SVUK_0002058501
I