Gorai.005G129200 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.005G129200 T181494_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G129200.1 FAR1 106 198
Gorai.005G129200.2 FAR1 71 163
Gorai.005G129200.3 FAR1 71 163
Gorai.005G129200.4 FAR1 105 197
Gorai.005G129200.5 FAR1 71 163

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N 0.989
29758.m000681 Ricinus communis 29758.m000681 N 0.764
Bo2g152930 Brassica oleracea Bo2g152930 N 0.899
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.910
Bra020611 Brassica rapa Bra020611 N 0.843
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.899
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.899
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.978
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.753
Ca_07896 Cicer arietinum Ca_07896 N 0.753
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.742
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.989
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.753
Cucsa.100320 Cucumis sativus Cucsa.100320 N 0.727
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.764
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.955
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.989
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.944
FRS10 Arabidopsis thaliana AT5G28530 N 0.899
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.955
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.730
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.764
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.775
MDP0000249284 Malus domestica MDP0000249284 N 0.753
mgf004308m Mimulus guttatus mgf004308m N 0.944
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.742
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.989
PK07950.1 Cannabis sativa PK07950.1 N 0.753
PK09224.1 Cannabis sativa PK09224.1 N 0.978
Pm015052 Prunus mume Pm015052 N 0.966
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.775
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.764
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.966
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.944
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.775
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.978
TCM_020251 Theobroma cacao TCM_020251 N 0.989
TCM_030416 Theobroma cacao TCM_030416 N 0.775
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.944
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.764