CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0089s0660
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0089s0660
T181907_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0089s0660.1.p
FAR1
68
160
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.2.p
FAR1
68
160
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.3.p
FAR1
68
160
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.4.p
FAR1
68
160
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.5.p
FAR1
68
160
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.6.p
FAR1
11
103
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
SapurV1A.0089s0660.7.p
FAR1
11
103
EYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPARKKSTAEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_039_00001
Aquilegia coerulea
Aquca_039_00001
N
0.000
Aquca_102_00001
Aquilegia coerulea
Aquca_102_00001
N
0.000
Bostr.10273s0360
Boechera stricta
Bostr.10273s0360
N
0.000
Cagra.10840s0006
Capsella grandiflora
Cagra.10840s0006
N
0.000
Carubv10022346m.g
Capsella rubella
Carubv10022346m.g
N
0.000
cassava21091.m1
Manihot esculenta
cassava21091.m1
N
0.000
cassava35563.valid.m1
Manihot esculenta
cassava35563.valid.m1
N
0.000
Eucgr.K01194
Eucalyptus grandis
Eucgr.K01194
N
0.000
gene24495-v1.0-hybrid
Fragaria vesca
gene24495-v1.0-hybrid
N
0.000
Gorai.012G042700
Gossypium raimondii
Gorai.012G042700
N
0.000
PGSC0003DMG400021240
Solanum tuberosum
PGSC0003DMG400021240
N
0.000
Pm014562
Prunus mume
Pm014562
N
0.000
PRUPE_ppa002590mg
Prunus persica
PRUPE_ppa002590mg
N
0.000
Solyc10g007810.2
Solanum lycopersicum
Solyc10g007810.2
N
0.000
TCM_001836
Theobroma cacao
TCM_001836
N
0.000
Thhalv10018229m.g
Eutrema salsugineum
Thhalv10018229m.g
N
0.000
VIT_12s0142g00390
Vitis vinifera
VIT_12s0142g00390
N
0.000