CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AUEXF2481DRAFT_6409
(
Aureobasidium subglaciale
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AUEXF2481DRAFT_6409
T191739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEQ93835
GATA
417
452
CADCGTLDSPEWRKGPKGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Aureobasidium subglaciale
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA031227
Oryza indica
BGIOSGA031227
N
0.000
Bra012832
Brassica rapa
Bra012832
N
0.000
Ca_10726
Cicer arietinum
Ca_10726
N
0.000
Cla010647
Citrullus lanatus
Cla010647
N
0.000
CRE07740
Caenorhabditis remanei
CRE07740
N
0.000
EEL_0000370701
Elaeophora elaphi
EEL_0000370701
N
0.000
fgenesh1_pg.C_scaffold_10000369
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_10000369
N
0.000
GLYMA16G22060
Glycine max
GLYMA16G22060
I
0.000
HelroG178674
Helobdella robusta
HelroG178674
N
0.000
Lus10013219.g
Linum usitatissimum
Lus10013219.g
N
0.000
Lus10016695.g
Linum usitatissimum
Lus10016695.g
N
0.000
Lus10027787.g
Linum usitatissimum
Lus10027787.g
N
0.000
Lus10035991.g
Linum usitatissimum
Lus10035991.g
N
0.000
MDP0000699531
Malus domestica
MDP0000699531
N
0.000
OBART09G18880
Oryza barthii
OBART09G18880
N
0.000
OGLUM09G19410
Oryza glumaepatula
OGLUM09G19410
N
0.000
OLONG_009629
Oryza longistaminata
OLONG_009629
N
0.000
OPUNC09G17310
Oryza punctata
OPUNC09G17310
N
0.000
PEQ_0000006801
Parascaris equorum
PEQ_0000006801
N
0.000
TriadG58720
Trichoplax adhaerens
TriadG58720
N
0.000
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.000