CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G23350
(
Brachypodium distachyon
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BRADI1G23350
T200022_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G23350.1
GRAS
179
549
LKELLVACARAVEEKNGYAIDMMIPELRKMVSVSGEPLQRLGAYMVEGLVARLASSGHSIYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVKITGIDDSVSAYARDGGLDIVGRRLSHIAGLCKVPFEFHAVAISGDEVEERHLGVIPGEALAVNFTLELHHISDETVSTANHRDRILRLVKSLSPNVLTLVEQESNTNTAPFVQRFAETLDYYTAIFESIDLTLPRDDKERINMEQHCLAREIVNLVACEGSERVERHEVFGKWKARLMMAGFRPSPLSSLVNDTIRTLLQSYSVNYQLAERDGVLYLGWKNRPLVVSSAWH
Links
Other
GRAS
family TFs
Other
Brachypodium distachyon
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27613.m000642
Ricinus communis
27613.m000642
N
0.729
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.721
BGIOSGA026022
Oryza indica
BGIOSGA026022
N
0.900
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.707
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.715
CIGR2
Oryza sativa
OS07G0583600
N
0.900
F775_15940
Aegilops tauschii
F775_15940
N
0.878
F775_28371
Aegilops tauschii
F775_28371
N
0.892
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.713
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.710
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.707
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.715
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.710
GRMZM2G098517
Zea mays
GRMZM2G098517
N
0.873
GRMZM2G431309
Zea mays
GRMZM2G431309
N
0.883
LPERR07G17460
Leersia perrieri
LPERR07G17460
N
0.894
MDP0000152670
Malus domestica
MDP0000152670
N
0.710
MDP0000804652
Malus domestica
MDP0000804652
N
0.707
MLOC_65838
Hordeum vulgare
MLOC_65838
N
0.897
OB07G25870
Oryza brachyantha
OB07G25870
N
0.894
OBART07G20130
Oryza barthii
OBART07G20130
N
0.897
OGLUM07G19910
Oryza glumaepatula
OGLUM07G19910
N
0.900
OMERI07G16830
Oryza meridionalis
OMERI07G16830
N
0.905
ONIVA07G18570
Oryza nivara
ONIVA07G18570
N
0.900
OPUNC07G19030
Oryza punctata
OPUNC07G19030
N
0.905
ORGLA07G0258500
Oryza glaberrima
ORGLA07G0258500
N
0.900
ORUFI07G20980
Oryza rufipogon
ORUFI07G20980
N
0.900
Pavir.Ba00562
Panicum virgatum
Pavir.Ba00562
N
0.902
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.732
Pm015021
Prunus mume
Pm015021
N
0.718
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.702
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.721
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.705
Sb02g037650
Sorghum bicolor
Sb02g037650
N
0.892
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.705
Si029418m.g
Setaria italica
Si029418m.g
N
0.900
TCM_002319
Theobroma cacao
TCM_002319
N
0.724
TCM_030733
Theobroma cacao
TCM_030733
N
0.707
Traes_2BS_D007D6598
Triticum aestivum
Traes_2BS_D007D6598
N
0.908
Traes_2DS_CCA2FCCAD
Triticum aestivum
Traes_2DS_CCA2FCCAD
N
0.894
Traes_5BL_1E751EF1F
Triticum aestivum
Traes_5BL_1E751EF1F
N
0.756
Traes_5BL_A7C4DAE11
Triticum aestivum
Traes_5BL_A7C4DAE11
N
0.875
Traes_5DL_B89CD8432
Triticum aestivum
Traes_5DL_B89CD8432
N
0.875