CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA01G45020
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA01G45020
T200825_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA01G45020.1
GRAS
39
423
ARGLVLACADLVHRGDLDGARRVAEAVLAVADPRGEAGDRLAHHFARALLALRGGGKGGHGGGGGGVVPSSAAYLAYIKIAPFLRFAHLTANQAILEAAAVAAADAGGAHRRVLHIVDLDAAHGVQWPPLLQAIADRADPAVGPPPEVRLTGAGTDRDVLLRTGDRLRAFSSSLNLPFRFHPLILPCTAELAADPTAALELHPDETLAVNCVLFLHKLGGDGELAAFLRWVKSMNPAVVTIAEREGVLGGDVDDDNVPDELPRRVAAAMDYYSSVFDALEATVPPASADRLAVEQEILSREIDAAVAAPGAGGGGRARDFDAWASAARAAGLAPRPLSAFAASQARLLLRLHYPSEGYKADDDGGRGACFLRWQQRPLMSVSSWQ
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G53600
Arabidopsis thaliana
AT3G53600
D
0.000
BGIOSGA033523
Oryza indica
BGIOSGA033523
N
0.000
BGIOSGA033525
Oryza indica
BGIOSGA033525
N
0.000
Bo00576s170
Brassica oleracea
Bo00576s170
I
0.000
Bo1g006590
Brassica oleracea
Bo1g006590
N
0.000
Bo6g067580
Brassica oleracea
Bo6g067580
I
0.000
Bo7g117320
Brassica oleracea
Bo7g117320
I
0.000
Bostr.11793s0034
Boechera stricta
Bostr.11793s0034
I
0.000
Bostr.7867s1389
Boechera stricta
Bostr.7867s1389
I
0.000
Bra003148
Brassica rapa
Bra003148
I
0.000
Bra011601
Brassica rapa
Bra011601
N
0.000
Bra017706
Brassica rapa
Bra017706
I
0.000
Bra030981
Brassica rapa
Bra030981
I
0.000
Bra039806
Brassica rapa
Bra039806
I
0.000
Cagra.0612s0086
Capsella grandiflora
Cagra.0612s0086
I
0.000
Cagra.2350s0072
Capsella grandiflora
Cagra.2350s0072
I
0.000
Carubv10018114m.g
Capsella rubella
Carubv10018114m.g
I
0.000
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.000
fgenesh2_kg.5__1736__AT3G53600.1
Arabidopsis lyrata
fgenesh2_kg.5__1736__AT3G53600.1
I
0.000
GSMUA_Achr6G34890_001
Musa acuminata
GSMUA_Achr6G34890_001
I
0.000
gw1.254.15.1
Physcomitrella patens
gw1.254.15.1
I
0.000
MDP0000237150
Malus domestica
MDP0000237150
I
0.000
OB11G27850
Oryza brachyantha
OB11G27850
N
0.000
ORUFI04G17060
Oryza rufipogon
ORUFI04G17060
N
0.000
OS11G0702300
Oryza sativa
OS11G0702300
N
0.000
PGSC0003DMG400015531
Solanum tuberosum
PGSC0003DMG400015531
I
0.000
PGSC0003DMG400015532
Solanum tuberosum
PGSC0003DMG400015532
I
0.000
PGSC0003DMG400015533
Solanum tuberosum
PGSC0003DMG400015533
I
0.000
PGSC0003DMG400015534
Solanum tuberosum
PGSC0003DMG400015534
I
0.000
PGSC0003DMG400015557
Solanum tuberosum
PGSC0003DMG400015557
I
0.000
scaffold_700593.1
Arabidopsis lyrata
scaffold_700593.1
I
0.000
Thhalv10010956m.g
Eutrema salsugineum
Thhalv10010956m.g
I
0.000
Thhalv10025912m.g
Eutrema salsugineum
Thhalv10025912m.g
I
0.000
ZAT11
Arabidopsis thaliana
AT2G37430
I
0.000