chr5.LjT08L18.130.nd (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr5.LjT08L18.130.nd T203287_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.LjT08L18.130.nd GRAS 76 457

Links

Other GRAS family TFs
Other Lotus japonicus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29728.m000844 Ricinus communis 29728.m000844 N 0.735
cassava25355.m1 Manihot esculenta cassava25355.m1 N 0.742
cassava27916.m1 Manihot esculenta cassava27916.m1 N 0.773
Ca_04298 Cicer arietinum Ca_04298 N 0.880
Ciclev10003213m.g Citrus clementina Ciclev10003213m.g N 0.745
Eucgr.F02630 Eucalyptus grandis Eucgr.F02630 N 0.751
gene27489-v1.0-hybrid Fragaria vesca gene27489-v1.0-hybrid N 0.717
GLYMA02G08241 Glycine max GLYMA02G08241 N 0.816
GLYMA10G35920 Glycine max GLYMA10G35920 N 0.894
GLYMA16G27310 Glycine max GLYMA16G27310 N 0.839
GLYMA20G31680 Glycine max GLYMA20G31680 N 0.888
Gorai.009G289600 Gossypium raimondii Gorai.009G289600 N 0.742
MDP0000162468 Malus domestica MDP0000162468 N 0.711
MDP0000169115 Malus domestica MDP0000169115 N 0.711
MDP0000203826 Malus domestica MDP0000203826 N 0.742
MDP0000512470 Malus domestica MDP0000512470 N 0.711
MTR_1g096030 Medicago truncatula MTR_1g096030 N 0.877
orange1.1g041748m.g Citrus sinensis orange1.1g041748m.g N 0.742
Pm022208 Prunus mume Pm022208 N 0.742
POPTR_0013s11930 Populus trichocarpa POPTR_0013s11930 N 0.772
POPTR_0019s11540 Populus trichocarpa POPTR_0019s11540 N 0.761
PRUPE_ppa017519mg Prunus persica PRUPE_ppa017519mg N 0.748
SapurV1A.0179s0200 Salix purpurea SapurV1A.0179s0200 N 0.747
SapurV1A.2874s0010 Salix purpurea SapurV1A.2874s0010 N 0.742
TCM_036707 Theobroma cacao TCM_036707 N 0.742