LotgiG157874 (Lottia gigantea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LotgiG157874 T220112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP006642
M02035_2.00 		Anopheles gambiae
NHTAATCY
RGATTADN		 PBM
Weirauch et al.(2014)
pTH6201 		0.676 0.456
dve
M02122_2.00 		Drosophila melanogaster
NTAATCCV
BGGATTAN		 PBM
Weirauch et al.(2014)
pTH6218 		0.676 0.456
PITX2
M00313_2.00 		Homo sapiens
NWAAKHYN
NRDMTTWN		 PBM
Barrera et al.(2016)
PITX2_REF 		0.631 0.439
Pitx1
M00415_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Pitx1_2312 		0.631 0.439
Pitx3
M00428_2.00 		Mus musculus
NTAAKCYN
NRGMTTAN		 PBM
Berger et al.(2008)
Pitx3_3497 		0.631 0.439
Pitx2
M00440_2.00 		Mus musculus
NTAATCCN
NGGATTAN		 PBM
Berger et al.(2008)
Pitx2_2274 		0.631 0.439
Ptx1
M02123_2.00 		Drosophila melanogaster
NTAATCYNN
NNRGATTAN		 PBM
Weirauch et al.(2014)
pTH5644 		0.631 0.439
Ptx1
M00562_2.00 		Drosophila melanogaster
NYTAATCCBN
NVGGATTARN		 PBM
Busser et al.(2012a)
Ptx1 		0.631 0.439
PITX1
M03082_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX1_1 		0.631 0.439
PITX1
M03083_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX1_2 		0.631 0.439
PITX1
M03084_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Jolma et al.(2013)
PITX1_3 		0.631 0.439
PITX3
M03111_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX3_1 		0.631 0.439
Ptx1
M03842_2.00 		Drosophila melanogaster
NTAATCCN
NGGATTAN		 SELEX
Nitta et al.(2015)
Ptx1_1 		0.631 0.439
Ptx1
M03843_2.00 		Drosophila melanogaster
NTAATCCN
NGGATTAN		 SELEX
Nitta et al.(2015)
Ptx1_2 		0.631 0.439
Ptx1
M03844_2.00 		Drosophila melanogaster
NCGHTAATCCN
NGGATTADCGN		 SELEX
Nitta et al.(2015)
Ptx1_3 		0.631 0.439
PITX1
M04928_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX 		0.631 0.439
PITX1
M04930_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX 		0.631 0.439
PITX2
M05229_2.00 		Homo sapiens
NTAAKCCN
NGGMTTAN		 SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX 		0.631 0.439
PITX2
M05231_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX 		0.631 0.439
PITX3
M04997_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX 		0.631 0.439
Ptx1
M06521_2.00 		Drosophila melanogaster
YTAATCC
GGATTAR		 B1H
Mathelier et al.(2014)
MA0201.1 		0.631 0.439
Ptx1
M06319_2.00 		Drosophila melanogaster
YTAATCC
GGATTAR		 B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912 		0.631 0.439
Ptx1
M06320_2.00 		Drosophila melanogaster
NYTAATCC
GGATTARN		 B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912 		0.631 0.439
Pitx1
M09182_2.00 		Mus musculus
NYWAAKCCYH
DRGGMTTWRN		 Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C 		0.631 0.439
PITX1
M10640_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX1_Q4 		0.631 0.439
PITX1
M10641_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX1_Q6 		0.631 0.439
PITX2
M10720_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q2 		0.631 0.439
PITX2
M10721_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q4 		0.631 0.439
PITX2
M10722_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q6 		0.631 0.439
PITX3
M10660_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q2 		0.631 0.439
PITX3
M10661_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q3_01 		0.631 0.439
PITX3
M10662_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q3 		0.631 0.439
PITX2
M00311_2.00 		Homo sapiens
TTAATCCY
RGGATTAA		 PBM
Barrera et al.(2016)
PITX2_R108H 		0.631 0.439
PITX2
M00312_2.00 		Homo sapiens
NNNTATWAATTNN
NNAATTWATANNN		 PBM
Barrera et al.(2016)
PITX2_R130W 		0.631 0.439
PITX2
M00314_2.00 		Homo sapiens
NTAATMYN
NRKATTAN		 PBM
Barrera et al.(2016)
PITX2_T114P 		0.631 0.439
PITX1
M04929_2.00 		Homo sapiens
NTAAKCCN
NGGMTTAN		 SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX 		0.631 0.439
PITX1
M04931_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX 		0.631 0.439
PITX2
M05230_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX 		0.631 0.439
PITX2
M05232_2.00 		Homo sapiens
YTAATCCY
RGGATTAR		 SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX 		0.631 0.439
PITX3
M04998_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX 		0.631 0.439
PITX2
M00310_2.00 		Homo sapiens
HTAATCYN
NRGATTAD		 PBM
Barrera et al.(2016)
PITX2_L100Q 		0.631 0.421
Gsc
M02120_2.00 		Drosophila melanogaster
NTAATCYN
NRGATTAN		 PBM
Weirauch et al.(2014)
pTH5511 		0.630 0.474
Gsc
M03817_2.00 		Drosophila melanogaster
TAATCCB
VGGATTA		 SELEX
Nitta et al.(2015)
Gsc_1 		0.630 0.474
Gsc
M03818_2.00 		Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA		 SELEX
Nitta et al.(2015)
Gsc_2 		0.630 0.474
Gsc
M03819_2.00 		Drosophila melanogaster
TAATCYNHTAATCBN
NVGATTADNRGATTA		 SELEX
Nitta et al.(2015)
Gsc_3 		0.630 0.474
Gsc
M03820_2.00 		Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA		 SELEX
Nitta et al.(2015)
Gsc_4 		0.630 0.474
Gsc
M03821_2.00 		Drosophila melanogaster
TAATCYNWTWATCYB
VRGATWAWNRGATTA		 SELEX
Nitta et al.(2015)
Gsc_5 		0.630 0.474
Gsc
M05873_2.00 		Drosophila melanogaster
TAATCSNHTWA
TWADNSGATTA		 SMiLE-seq
Isakova et al.(2017)
Gsc 		0.630 0.474
Gsc
M06509_2.00 		Drosophila melanogaster
TAATCY
RGATTA		 B1H
Mathelier et al.(2014)
MA0190.1 		0.630 0.474
Gsc
M06297_2.00 		Drosophila melanogaster
VNTAATCY
RGATTANB		 B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323 		0.630 0.474
Gsc
M06298_2.00 		Drosophila melanogaster
NTAATCY
RGATTAN		 B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323 		0.630 0.474
CBG01820
M01241_2.00 		Caenorhabditis briggsae
NTAATCCN
NGGATTAN		 PBM
Lambert et al.(2019)
pTH11454 		0.629 0.404
Dmbx1
M00441_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Dmbx1_2277 		0.624 0.456
DMBX1
M03236_2.00 		Homo sapiens
NHTAATCCBN
NVGGATTADN		 SELEX
Jolma et al.(2013)
DMBX1_1 		0.624 0.456
DMBX1
M05383_2.00 		Homo sapiens
NTAATCSN
NSGATTAN		 SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX 		0.624 0.456
DMBX1
M05384_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX 		0.624 0.456
ceh-53
M00679_2.00 		Caenorhabditis elegans
HTAATCYN
NRGATTAD		 PBM
Narasimhan et al.(2015)
pTH10699 		0.622 0.421
ceh-36
M00673_2.00 		Caenorhabditis elegans
NWAATCYN
NRGATTWN		 PBM
Narasimhan et al.(2015)
pTH10730 		0.621 0.404
NEMVEDRAFT_v1g113057
M02144_2.00 		Nematostella vectensis
NYTAATCCBN
NVGGATTARN		 PBM
Weirauch et al.(2014)
pTH6135 		0.621 0.439
GSC2
M03080_2.00 		Homo sapiens
NHTAATCCBH
DVGGATTADN		 SELEX
Jolma et al.(2013)
GSC2_1 		0.611 0.386
GSC2
M04920_2.00 		Homo sapiens
NTAATNNN
NNNATTAN		 SELEX
Yin et al.(2017)
GSC2_eDBD_HT-SELEX 		0.611 0.386
GSC2
M04921_2.00 		Homo sapiens
NTAATCYN
NRGATTAN		 SELEX
Yin et al.(2017)
GSC2_eDBD_Methyl-HT-SELEX 		0.611 0.386
Gsc
M00411_2.00 		Mus musculus
NNTAATYBN
NVRATTANN		 PBM
Berger et al.(2008)
Gsc_2327 		0.608 0.439
GSC
M03146_2.00 		Homo sapiens
NHTAATCCNH
DNGGATTADN		 SELEX
Jolma et al.(2013)
GSC_1 		0.608 0.439
GSC
M05134_2.00 		Homo sapiens
NTAATCCB
VGGATTAN		 SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX 		0.608 0.439
GSC
M05136_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX 		0.608 0.439
gsc
M09584_2.00 		Xenopus tropicalis
NTAATCYN
NRGATTAN		 Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576 		0.608 0.439
GSC
M05135_2.00 		Homo sapiens
HTAATCCB
VGGATTAD		 SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX 		0.608 0.439
GSC
M05137_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX 		0.608 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP157874 Homeodomain 26 83

Links

Other Homeodomain family TFs
Other Lottia gigantea TFs

698 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N 0.000
AAH41216 Xenopus laevis AAH41216 N 0.000
AALB002196 Anopheles albimanus AALB002196 N 0.000
AARA006951 Anopheles arabiensis AARA006951 N 0.000
AATE020748 Anopheles atroparvus AATE020748 N 0.000
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.000
ACEP21543 Atta cephalotes ACEP21543 N 0.000
ACHR000824 Anopheles christyi ACHR000824 N 0.000
ACOM023536 Anopheles coluzzii ACOM023536 N 0.000
ACUA002517 Anopheles culicifacies ACUA002517 N 0.000
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.000
ADAC004863 Anopheles darlingi ADAC004863 N 0.000
ADIR010513 Anopheles dirus ADIR010513 N 0.000
AEPI007457 Anopheles epiroticus AEPI007457 N 0.000
AFAF004631 Anopheles farauti AFAF004631 N 0.000
AFUN008276 Anopheles funestus AFUN008276 N 0.000
AGAP001994 Anopheles gambiae AGAP001994 N 0.000
AMAM007470 Anopheles maculatus AMAM007470 N 0.000
AMEC010472 Anopheles melas AMEC010472 N 0.000
AMEM015770 Anopheles merus AMEM015770 N 0.000
AMIN003302 Anopheles minimus AMIN003302 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.000
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.000
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.000
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.000
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.000
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.000
ASIS021704 Anopheles sinensis ASIS021704 N 0.000
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.000
A_05744 Schistosoma haematobium A_05744 N 0.000
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.000
CapteG156119 Capitella teleta CapteG156119 N 0.000
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.000
CLEC001104 Cimex lectularius CLEC001104 N 0.000
CLEC009203 Cimex lectularius CLEC009203 N 0.000
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.000
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.000
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.000
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.000
csin103376 Clonorchis sinensis csin103376 N 0.000
D915_15883 Fasciola hepatica D915_15883 N 0.000
D918_01415 Trichuris suis D918_01415 N 0.000
dalao Drosophila melanogaster FBgn0030093 N 0.000
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.000
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.000
EDI_110640 Entamoeba dispar EDI_110640 N 0.000
EHI_179340 Entamoeba histolytica EHI_179340 N 0.000
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.000
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.000
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.000
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.000
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.000
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.000
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.000
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.000
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.000
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.000
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.000
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.000
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.000
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.000
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.000
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.000
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.000
GB50847 Apis mellifera GB50847 N 0.000
GD16931 Drosophila simulans FBgn0188511 N 0.000
GE15824 Drosophila yakuba FBgn0233388 N 0.000
GF19131 Drosophila ananassae FBgn0096142 N 0.000
GG18291 Drosophila erecta FBgn0110507 N 0.000
GH12291 Drosophila grimshawi FBgn0119770 N 0.000
GI15536 Drosophila mojavensis FBgn0138285 N 0.000
GJ14880 Drosophila virilis FBgn0202084 N 0.000
GK25765 Drosophila willistoni FBgn0227724 N 0.000
GL26801 Drosophila persimilis FBgn0164382 N 0.000
GM13722 Drosophila sechellia FBgn0168653 N 0.000
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.000
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.000
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.000
HelroG188630 Helobdella robusta HelroG188630 N 0.000
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.000
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.000
HMEL010720 Heliconius melpomene HMEL010720 N 0.000
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.000
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.000
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.000
ISCW021016 Ixodes scapularis ISCW021016 N 0.000
KGM_12870 Danaus plexippus KGM_12870 N 0.000
L798_00593 Zootermopsis nevadensis L798_00593 N 0.000
L889_g3706 Steinernema feltiae L889_g3706 N 0.000
LCUP013669 Lucilia cuprina LCUP013669 N 0.000
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.000
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.000
LotgiG111061 Lottia gigantea LotgiG111061 N 0.000
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.000
MDOA009352 Musca domestica MDOA009352 N 0.000
NECAME_16117 Necator americanus NECAME_16117 N 0.000
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.000
NV11999 Nasonia vitripennis NV11999 N 0.000
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.000
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.000
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.000
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.000
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.000
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.000
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.000
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.000
SMAR004982 Strigamia maritima SMAR004982 N 0.000
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.000
smarce1 Oryzias latipes ENSORLG00000018629 N 0.000
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.000
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.000
Smp_154640 Schistosoma mansoni Smp_154640 N 0.000
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.000
SMU15003232 Schmidtea mediterranea SMU15003232 N 0.000
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.000
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.000
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.000
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.000
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.000
T265_02983 Opisthorchis viverrini T265_02983 N 0.000
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.000
TC007745 Tribolium castaneum TC007745 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.000
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.000
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.000
TsM_000047400 Taenia solium TsM_000047400 N 0.000
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.000
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.000
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.000