LPERR08G02370 (Leersia perrieri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LPERR08G02370 T220272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.843 0.947
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.843 0.947
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.831 0.930
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.831 0.930
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.824 0.772
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.824 0.772
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.821 0.807
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.808 0.807
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.808 0.807
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.808 0.807
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.804 0.772
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.804 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.802 0.667
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.766 0.737
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.766 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR08G02370.1 Homeodomain 132 189

Links

Other Homeodomain family TFs
Other Leersia perrieri TFs

619 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21342_YDR034C Saccharomyces bayanus 21342_YDR034C I
30135.m000188 Ricinus communis 30135.m000188 I 0.755
30146.m003568 Ricinus communis 30146.m003568 I 0.751
3344_Multiple Saccharomyces mikatae 3344_Multiple I
3859_YDR034C Saccharomyces paradoxus 3859_YDR034C I
AACERI_AaceriABL099W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL099W I
AGOS_ABL099W Ashbya gossypii AGOS_ABL099W N
AMTR_s00048p00089530 Amborella trichopoda AMTR_s00048p00089530 I 0.787
AMTR_s00109p00072520 Amborella trichopoda AMTR_s00109p00072520 I 0.747
Aquca_001_00425 Aquilegia coerulea Aquca_001_00425 I 0.751
Aquca_012_00126 Aquilegia coerulea Aquca_012_00126 I 0.687
BGIOSGA021700 Oryza indica BGIOSGA021700 I 0.789
Bo00831s050 Brassica oleracea Bo00831s050 I 0.713
Bo1g154790 Brassica oleracea Bo1g154790 I 0.742
Bo2g013570 Brassica oleracea Bo2g013570 I 0.781
Bo2g018400 Brassica oleracea Bo2g018400 I 0.660
Bo4g045920 Brassica oleracea Bo4g045920 I 0.764
Bo4g177910 Brassica oleracea Bo4g177910 I 0.761
Bo5g150100 Brassica oleracea Bo5g150100 I 0.649
Bo6g069620 Brassica oleracea Bo6g069620 I 0.752
Bo6g079990 Brassica oleracea Bo6g079990 I 0.751
Bo8g049710 Brassica oleracea Bo8g049710 I 0.663
Bo8g067530 Brassica oleracea Bo8g067530 I 0.714
Bostr.19046s0037 Boechera stricta Bostr.19046s0037 I 0.698
Bostr.20129s0530 Boechera stricta Bostr.20129s0530 I 0.751
Bostr.23794s0877 Boechera stricta Bostr.23794s0877 I 0.677
Bostr.30275s0233 Boechera stricta Bostr.30275s0233 I 0.737
Bostr.7128s0399 Boechera stricta Bostr.7128s0399 I 0.714
Bostr.7867s0363 Boechera stricta Bostr.7867s0363 I 0.619
Bra003213 Brassica rapa Bra003213 I 0.752
Bra003535 Brassica rapa Bra003535 I 0.751
Bra003846 Brassica rapa Bra003846 I 0.800
Bra005588 Brassica rapa Bra005588 I 0.764
Bra007562 Brassica rapa Bra007562 I 0.749
Bra008562 Brassica rapa Bra008562 I 0.692
Bra016578 Brassica rapa Bra016578 I 0.714
Bra020066 Brassica rapa Bra020066 I 0.661
Bra021035 Brassica rapa Bra021035 I 0.641
Bra021363 Brassica rapa Bra021363 N 0.603
Bra021779 Brassica rapa Bra021779 I 0.761
Bra023611 Brassica rapa Bra023611 I 0.781
Bra025938 Brassica rapa Bra025938 I 0.713
Bra032003 Brassica rapa Bra032003 I 0.671
Bra038757 Brassica rapa Bra038757 I 0.610
BRADI1G46247 Brachypodium distachyon BRADI1G46247 I 0.768
BRADI5G18717 Brachypodium distachyon BRADI5G18717 I 0.606
BRADI5G22570 Brachypodium distachyon BRADI5G22570 I 0.752
CAGL0K11902g Candida glabrata CAGL0K11902g I
Cagra.0094s0026 Capsella grandiflora Cagra.0094s0026 I 0.730
Cagra.0288s0001 Capsella grandiflora Cagra.0288s0001 I 0.751
Cagra.0352s0025 Capsella grandiflora Cagra.0352s0025 I 0.652
Cagra.2098s0060 Capsella grandiflora Cagra.2098s0060 I 0.665
Cagra.2175s0023 Capsella grandiflora Cagra.2175s0023 I 0.714
Cagra.3356s0062 Capsella grandiflora Cagra.3356s0062 I 0.657
Cagra.4849s0002 Capsella grandiflora Cagra.4849s0002 I 0.782
Carubv10002574m.g Capsella rubella Carubv10002574m.g I 0.782
Carubv10008485m.g Capsella rubella Carubv10008485m.g I 0.714
Carubv10015764m.g Capsella rubella Carubv10015764m.g I 0.665
Carubv10019989m.g Capsella rubella Carubv10019989m.g I 0.751
Carubv10022676m.g Capsella rubella Carubv10022676m.g I 0.652
Carubv10028346m.g Capsella rubella Carubv10028346m.g I 0.730
cassava12093.valid.m1 Manihot esculenta cassava12093.valid.m1 I 0.750
cassava23105.valid.m1 Manihot esculenta cassava23105.valid.m1 I 0.798
cassava31450.valid.m1 Manihot esculenta cassava31450.valid.m1 I 0.751
Ca_02812 Cicer arietinum Ca_02812 I 0.751
Ca_04629 Cicer arietinum Ca_04629 I 0.648
Ca_11891 Cicer arietinum Ca_11891 I 0.632
Ciclev10006467m.g Citrus clementina Ciclev10006467m.g I 0.633
Ciclev10024950m.g Citrus clementina Ciclev10024950m.g I 0.773
Cla006300 Citrullus lanatus Cla006300 I 0.780
Cla012872 Citrullus lanatus Cla012872 I 0.751
Cla013352 Citrullus lanatus Cla013352 I 0.781
Cla014693 Citrullus lanatus Cla014693 I 0.706
Cla019695 Citrullus lanatus Cla019695 I 0.797
Cucsa.045360 Cucumis sativus Cucsa.045360 I 0.706
Cucsa.061970 Cucumis sativus Cucsa.061970 I 0.751
Cucsa.086030 Cucumis sativus Cucsa.086030 I 0.797
Cucsa.108510 Cucumis sativus Cucsa.108510 I 0.781
Cucsa.250870 Cucumis sativus Cucsa.250870 I 0.780
Ecym_5131 Eremothecium cymbalariae Ecym_5131 I
Eucgr.F02903 Eucalyptus grandis Eucgr.F02903 I 0.736
Eucgr.F03040 Eucalyptus grandis Eucgr.F03040 I 0.751
Eucgr.K00234 Eucalyptus grandis Eucgr.K00234 I 0.770
evm.TU.supercontig_107.25 Carica papaya evm.TU.supercontig_107.25 I 0.802
evm.TU.supercontig_178.19 Carica papaya evm.TU.supercontig_178.19 I 0.684
evm.TU.supercontig_178.20 Carica papaya evm.TU.supercontig_178.20 I 0.801
evm.TU.supercontig_98.6 Carica papaya evm.TU.supercontig_98.6 I 0.751
F775_16103 Aegilops tauschii F775_16103 I 0.768
F775_24971 Aegilops tauschii F775_24971 I 0.622
gene13306-v1.0-hybrid Fragaria vesca gene13306-v1.0-hybrid I 0.802
GL2 Arabidopsis thaliana AT1G79840 I 0.751
GL2 Vitis vinifera VIT_09s0002g04340 I 0.751
GLYMA01G45070 Glycine max GLYMA01G45070 I 0.714
GLYMA05G33520 Glycine max GLYMA05G33520 I 0.789
GLYMA07G02220 Glycine max GLYMA07G02220 I 0.750
GLYMA08G06190 Glycine max GLYMA08G06190 I 0.789
GLYMA08G21890 Glycine max GLYMA08G21890 I 0.750
GLYMA11G00570 Glycine max GLYMA11G00570 I 0.714
GLYMA13G43350 Glycine max GLYMA13G43350 I 0.751
GLYMA15G01960 Glycine max GLYMA15G01960 I 0.751
Gorai.004G120700 Gossypium raimondii Gorai.004G120700 I 0.802
Gorai.006G047300 Gossypium raimondii Gorai.006G047300 I 0.714
Gorai.009G135100 Gossypium raimondii Gorai.009G135100 I 0.751
Gorai.011G016200 Gossypium raimondii Gorai.011G016200 I 0.797
GSMUA_Achr11G03290_001 Musa acuminata GSMUA_Achr11G03290_001 I 0.764
GSMUA_Achr2G15140_001 Musa acuminata GSMUA_Achr2G15140_001 I 0.800
GSMUA_Achr3G12410_001 Musa acuminata GSMUA_Achr3G12410_001 I 0.719
GSMUA_Achr3G15400_001 Musa acuminata GSMUA_Achr3G15400_001 I 0.731
GSMUA_Achr4G19010_001 Musa acuminata GSMUA_Achr4G19010_001 I 0.787
GSMUA_Achr7G00210_001 Musa acuminata GSMUA_Achr7G00210_001 I 0.707
GSMUA_Achr8G27340_001 Musa acuminata GSMUA_Achr8G27340_001 I 0.731
HDG12 Arabidopsis thaliana AT1G17920 I 0.714
HDG3 Arabidopsis thaliana AT2G32370 I 0.668
HDG4 Arabidopsis thaliana AT4G17710 I 0.798
HDG7 Arabidopsis thaliana AT5G52170 D 0.766
HDG8 Arabidopsis thaliana AT3G03260 I 0.708
KAFR_0E01250 Kazachstania africana KAFR_0E01250 I
KLLA0_F04213g Kluyveromyces lactis KLLA0_F04213g I
KLTH0C07480g Lachancea thermotolerans KLTH0C07480g N
KLTH0C07480g Kluyveromyces thermotolerans KLTH0C07480g N
KNAG_0H01260 Kazachstania naganishii KNAG_0H01260 I
Kpol_1061p11 Vanderwaltozyma polyspora Kpol_1061p11 I
LPERR01G27250 Leersia perrieri LPERR01G27250 I 0.731
LPERR06G06240 Leersia perrieri LPERR06G06240 I 0.789
Lus10005757.g Linum usitatissimum Lus10005757.g I 0.629
Lus10005759.g Linum usitatissimum Lus10005759.g I 0.788
Lus10011440.g Linum usitatissimum Lus10011440.g I 0.751
Lus10027437.g Linum usitatissimum Lus10027437.g I 0.788
Lus10037554.g Linum usitatissimum Lus10037554.g I 0.751
Lus10038877.g Linum usitatissimum Lus10038877.g I 0.684
LYS14 Saccharomyces cerevisiae YDR034C D
MDP0000142893 Malus domestica MDP0000142893 I 0.751
MDP0000204639 Malus domestica MDP0000204639 I 0.605
MDP0000233235 Malus domestica MDP0000233235 I 0.751
MDP0000322550 Malus domestica MDP0000322550 I 0.780
mgf007384m Mimulus guttatus mgf007384m I 0.782
mgf015186m Mimulus guttatus mgf015186m I 0.777
mgf015456m Mimulus guttatus mgf015456m I 0.763
mgf017210m Mimulus guttatus mgf017210m I 0.777
mgf018185m Mimulus guttatus mgf018185m I 0.793
mgf020582m Mimulus guttatus mgf020582m I 0.751
mgf022607m Mimulus guttatus mgf022607m I 0.777
mgf022779m Mimulus guttatus mgf022779m I 0.801
mgf025279m Mimulus guttatus mgf025279m I 0.777
mgf025303m Mimulus guttatus mgf025303m I 0.777
MTR_2g101720 Medicago truncatula MTR_2g101720 I 0.751
NDAI_0A05750 Naumovozyma dairenensis NDAI_0A05750 I
OB01G40650 Oryza brachyantha OB01G40650 I 0.731
OB06G16250 Oryza brachyantha OB06G16250 I 0.789
OB09G23660 Oryza brachyantha OB09G23660 I 0.786
OBART01G31750 Oryza barthii OBART01G31750 I 0.726
OBART06G06830 Oryza barthii OBART06G06830 I 0.789
OGLUM01G35890 Oryza glumaepatula OGLUM01G35890 I 0.726
OGLUM06G07200 Oryza glumaepatula OGLUM06G07200 I 0.789
OMERI06G08000 Oryza meridionalis OMERI06G08000 I 0.789
ONIVA01G36080 Oryza nivara ONIVA01G36080 I 0.726
ONIVA06G08130 Oryza nivara ONIVA06G08130 I 0.789
OPUNC01G30780 Oryza punctata OPUNC01G30780 I 0.726
OPUNC06G06470 Oryza punctata OPUNC06G06470 I 0.789
orange1.1g003954m.g Citrus sinensis orange1.1g003954m.g I 0.802
orange1.1g004271m.g Citrus sinensis orange1.1g004271m.g I 0.773
orange1.1g046202m.g Citrus sinensis orange1.1g046202m.g I 0.633
ORGLA01G0257700 Oryza glaberrima ORGLA01G0257700 I 0.726
ORGLA06G0063600 Oryza glaberrima ORGLA06G0063600 I 0.789
ORGLA06G0247800 Oryza glaberrima ORGLA06G0247800 I 0.789
ORUFI01G34950 Oryza rufipogon ORUFI01G34950 I 0.726
ORUFI06G07070 Oryza rufipogon ORUFI06G07070 I 0.789
OS01G0760800 Oryza sativa OS01G0760800 I 0.726
OS06G0208100 Oryza sativa OS06G0208100 I 0.789
OS09G0526300 Oryza sativa OS09G0526300 I 0.786
Pavir.Da01949 Panicum virgatum Pavir.Da01949 I 0.745
Pavir.Db02040 Panicum virgatum Pavir.Db02040 I 0.777
Pavir.Ea02783 Panicum virgatum Pavir.Ea02783 I 0.743
PDK_20s1301341g001 Phoenix dactylifera PDK_20s1301341g001 I 0.609
PDK_20s1897821g002 Phoenix dactylifera PDK_20s1897821g002 I 0.731
PGSC0003DMG400002627 Solanum tuberosum PGSC0003DMG400002627 I 0.751
PGSC0003DMG400007733 Solanum tuberosum PGSC0003DMG400007733 I 0.777
PGSC0003DMG400014279 Solanum tuberosum PGSC0003DMG400014279 I 0.767
PGSC0003DMG400026962 Solanum tuberosum PGSC0003DMG400026962 I 0.708
PGSC0003DMG400043695 Solanum tuberosum PGSC0003DMG400043695 I 0.792
PK00670.1 Cannabis sativa PK00670.1 I 0.800
PK06948.1 Cannabis sativa PK06948.1 I 0.751
Pm013001 Prunus mume Pm013001 I 0.780
Pm013549 Prunus mume Pm013549 I 0.751
Pm019365 Prunus mume Pm019365 I 0.800
POPTR_0001s18470 Populus trichocarpa POPTR_0001s18470 I 0.751
POPTR_0003s05100 Populus trichocarpa POPTR_0003s05100 I 0.751
POPTR_0004s07310 Populus trichocarpa POPTR_0004s07310 I 0.753
POPTR_0012s13390 Populus trichocarpa POPTR_0012s13390 I 0.632
POPTR_0015s13340 Populus trichocarpa POPTR_0015s13340 I 0.632
POPTR_0017s01400 Populus trichocarpa POPTR_0017s01400 I 0.774
PRUPE_ppa001840mg Prunus persica PRUPE_ppa001840mg I 0.751
PRUPE_ppa001894mg Prunus persica PRUPE_ppa001894mg I 0.800
PRUPE_ppa002343mg Prunus persica PRUPE_ppa002343mg I 0.780
SAKL0D03586g Lachancea kluyveri SAKL0D03586g I
SapurV1A.0068s0140 Salix purpurea SapurV1A.0068s0140 I 0.632
SapurV1A.0231s0010 Salix purpurea SapurV1A.0231s0010 I 0.780
SapurV1A.0370s0030 Salix purpurea SapurV1A.0370s0030 I 0.751
SapurV1A.0392s0030 Salix purpurea SapurV1A.0392s0030 I 0.776
Sb03g036820 Sorghum bicolor Sb03g036820 I 0.604
Sb10g006820 Sorghum bicolor Sb10g006820 I 0.789
SELMODRAFT_234698 Selaginella moellendorffii SELMODRAFT_234698 I 0.773
SELMODRAFT_450555 Selaginella moellendorffii SELMODRAFT_450555 I 0.703
SELMODRAFT_450557 Selaginella moellendorffii SELMODRAFT_450557 I 0.703
SELMODRAFT_450564 Selaginella moellendorffii SELMODRAFT_450564 I 0.773
Si004904m.g Setaria italica Si004904m.g I 0.742
Si005966m.g Setaria italica Si005966m.g I 0.784
SKUD_203807 Saccharomyces kudriavzevii SKUD_203807 I
Solyc03g026070.2 Solanum lycopersicum Solyc03g026070.2 I 0.767
Solyc03g120620.2 Solanum lycopersicum Solyc03g120620.2 I 0.751
Solyc05g015030.1 Solanum lycopersicum Solyc05g015030.1 I 0.603
Solyc06g072310.2 Solanum lycopersicum Solyc06g072310.2 I 0.708
Solyc08g062510.2 Solanum lycopersicum Solyc08g062510.2 I 0.603
Solyc09g066030.1 Solanum lycopersicum Solyc09g066030.1 I 0.723
Solyc09g066060.1 Solanum lycopersicum Solyc09g066060.1 I 0.724
Solyc11g011940.1 Solanum lycopersicum Solyc11g011940.1 I 0.672
SU7_0595 Saccharomyces arboricola SU7_0595 I
TCM_015114 Theobroma cacao TCM_015114 I 0.800
TCM_017892 Theobroma cacao TCM_017892 I 0.718
TCM_025205 Theobroma cacao TCM_025205 I 0.738
TCM_028767 Theobroma cacao TCM_028767 I 0.751
Thhalv10006969m.g Eutrema salsugineum Thhalv10006969m.g I 0.714
Thhalv10012776m.g Eutrema salsugineum Thhalv10012776m.g I 0.666
Thhalv10015677m.g Eutrema salsugineum Thhalv10015677m.g I 0.762
Thhalv10017809m.g Eutrema salsugineum Thhalv10017809m.g I 0.764
Thhalv10018234m.g Eutrema salsugineum Thhalv10018234m.g I 0.751
Thhalv10021974m.g Eutrema salsugineum Thhalv10021974m.g I 0.686
Thhalv10026759m.g Eutrema salsugineum Thhalv10026759m.g I 0.684
TPHA_0M01040 Tetrapisispora phaffii TPHA_0M01040 I
TRAES3BF023000040CFD_g Triticum aestivum TRAES3BF023000040CFD_g I 0.707
Traes_7AS_D4F03387A Triticum aestivum Traes_7AS_D4F03387A I 0.768
TRIUR3_28826 Triticum urartu TRIUR3_28826 I 0.622
VIT_04s0079g00480 Vitis vinifera VIT_04s0079g00480 I 0.632
VIT_09s0018g02100 Vitis vinifera VIT_09s0018g02100 I 0.691
VIT_16s0100g00670 Vitis vinifera VIT_16s0100g00670 I 0.768
ZBAI_04585 Zygosaccharomyces bailii ZBAI_04585 I
ZBAI_06624 Zygosaccharomyces bailii ZBAI_06624 I
ZYRO0A03058g Zygosaccharomyces rouxii ZYRO0A03058g I