RHTO_06229 (Rhodosporidium toruloides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 RHTO_06229 T222843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAD26261
M02055_2.00 		Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN		 PBM
Weirauch et al.(2014)
pTH6363 		0.668 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS24225 Homeodomain 217 273

Links

Other Homeodomain family TFs
Other Rhodosporidium toruloides TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30209.m001510 Ricinus communis 30209.m001510 N
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N
BGIOSGA021223 Oryza indica BGIOSGA021223 N
Bo1g117640 Brassica oleracea Bo1g117640 N
Bra037587 Brassica rapa Bra037587 N
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N
Cucsa.032420 Cucumis sativus Cucsa.032420 N
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N
GLYMA06G35561 Glycine max GLYMA06G35561 N
GLYMA12G18490 Glycine max GLYMA12G18490 N
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N
GRMZM2G126170 Zea mays GRMZM2G126170 N
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N
LPERR06G11990 Leersia perrieri LPERR06G11990 N
Lus10013684.g Linum usitatissimum Lus10013684.g N
Lus10017944.g Linum usitatissimum Lus10017944.g N
MDP0000268133 Malus domestica MDP0000268133 N
MDP0000315095 Malus domestica MDP0000315095 N
mgf014854m Mimulus guttatus mgf014854m N
MLOC_61712 Hordeum vulgare MLOC_61712 N
OBART06G15310 Oryza barthii OBART06G15310 N
OLONG_009306 Oryza longistaminata OLONG_009306 N
OMERI06G16500 Oryza meridionalis OMERI06G16500 N
OPUNC06G13990 Oryza punctata OPUNC06G13990 N
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N
OS06G0485100 Oryza sativa OS06G0485100 N
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N
PK03811.1 Cannabis sativa PK03811.1 N
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N
Sb02g020940 Sorghum bicolor Sb02g020940 N
Si030167m.g Setaria italica Si030167m.g N
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N
TCM_046875 Theobroma cacao TCM_046875 N
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N
TRIUR3_19251 Triticum urartu TRIUR3_19251 N
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N