estExt_fgenesh2_pg.C_1150041 (Physcomitrella patens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgenesh2_pg.C_1150041 T227359_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1150041 Homeodomain 45 104

Links

Other Homeodomain family TFs
Other Physcomitrella patens TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N
29758.m000681 Ricinus communis 29758.m000681 N
Bo2g152930 Brassica oleracea Bo2g152930 N
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N
Bra020611 Brassica rapa Bra020611 N
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N
Carubv10000250m.g Capsella rubella Carubv10000250m.g N
cassava40276.m1 Manihot esculenta cassava40276.m1 N
cassava40936.m1 Manihot esculenta cassava40936.m1 N
Ca_07896 Cicer arietinum Ca_07896 N
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N
Cucsa.044640 Cucumis sativus Cucsa.044640 N
Cucsa.100320 Cucumis sativus Cucsa.100320 N
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N
FRS10 Vitis vinifera VIT_12s0057g00960 N
FRS10 Arabidopsis thaliana AT5G28530 N
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N
GLYMA09G01540 Glycine max GLYMA09G01540 N
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N
MDP0000249284 Malus domestica MDP0000249284 N
mgf004308m Mimulus guttatus mgf004308m N
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N
PK07950.1 Cannabis sativa PK07950.1 N
PK09224.1 Cannabis sativa PK09224.1 N
Pm015052 Prunus mume Pm015052 N
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N
TCM_020251 Theobroma cacao TCM_020251 N
TCM_030416 Theobroma cacao TCM_030416 N
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N