Ciclev10027184m.g (Citrus clementina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ciclev10027184m.g T228421_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.638 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10027184m Homeodomain 152 212

Links

Other Homeodomain family TFs
Other Citrus clementina TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035741 Oryza indica BGIOSGA035741 N 0.000
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.000
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.000
F775_32974 Aegilops tauschii F775_32974 N 0.000
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.000
GRMZM2G179325 Zea mays GRMZM2G179325 N 0.000
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
OB12G23410 Oryza brachyantha OB12G23410 N 0.000
OBART11G23670 Oryza barthii OBART11G23670 N 0.000
OBART12G16530 Oryza barthii OBART12G16530 N 0.000
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.000
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.000
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.000
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.000
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.000
ORGLA11G0190200 Oryza glaberrima ORGLA11G0190200 N 0.000
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N 0.000
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.000
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.000
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.000
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.000
OS11G0705200 Oryza sativa OS11G0705200 N 0.000
OS12G0573200 Oryza sativa OS12G0573200 N 0.000
Pavir.Ha00318 Panicum virgatum Pavir.Ha00318 N 0.000
Pavir.J08330 Panicum virgatum Pavir.J08330 N 0.000
Pavir.J10950 Panicum virgatum Pavir.J10950 N 0.000
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.000
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.000
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.000
TRAES3BF026400020CFD_g Triticum aestivum TRAES3BF026400020CFD_g N 0.000
Traes_4AL_977AF4963 Triticum aestivum Traes_4AL_977AF4963 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_5AS_710247B67 Triticum aestivum Traes_5AS_710247B67 N 0.000
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000
Traes_5DS_C06FE6037 Triticum aestivum Traes_5DS_C06FE6037 N 0.000
TRIUR3_22881 Triticum urartu TRIUR3_22881 N 0.000