HPBE_0000247501 (Heligmosomoides bakeri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HPBE_0000247501 T234393_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.764 0.553
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.764 0.553
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.764 0.553
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.764 0.553
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.764 0.553
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.764 0.553
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.764 0.553
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.764 0.553
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.764 0.553
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.685 0.404
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.685 0.404
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.685 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0000247501-mRNA-1 Homeodomain 64 110

Links

Other Homeodomain family TFs
Other Heligmosomoides bakeri TFs

1181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004033 Aedes aegypti AAEL004033 N 0.000
AALB008452 Anopheles albimanus AALB008452 N 0.000
AARA011457 Anopheles arabiensis AARA011457 I 0.000
AATE008437 Anopheles atroparvus AATE008437 N 0.000
ACEP17328 Atta cephalotes ACEP17328 N 0.000
ACUA026159 Anopheles culicifacies ACUA026159 N 0.000
ADIR006386 Anopheles dirus ADIR006386 N 0.000
AEPI002734 Anopheles epiroticus AEPI002734 N 0.000
AFAF005788 Anopheles farauti AFAF005788 N 0.000
Afo_R002915 Aptenodytes forsteri Afo_R002915 N 0.000
AFUN008465 Anopheles funestus AFUN008465 I 0.000
AMAM013696 Anopheles maculatus AMAM013696 N 0.000
AMEC008489 Anopheles melas AMEC008489 I 0.000
AMEC022035 Anopheles melas AMEC022035 N 0.000
AMEM013182 Anopheles merus AMEM013182 N 0.000
AMIN002697 Anopheles minimus AMIN002697 N 0.000
ANCDUO_24100 Ancylostoma duodenale ANCDUO_24100 N 0.000
AQUA009532 Anopheles quadriannulatus AQUA009532 N 0.000
ASIM_0001695301 Anisakis simplex ASIM_0001695301 N 0.000
ASIS009140 Anopheles sinensis ASIS009140 I 0.000
ASIS022603 Anopheles sinensis ASIS022603 N 0.000
A_02867 Schistosoma haematobium A_02867 N 0.000
BGIBMGA010051 Bombyx mori BGIBMGA010051 N 0.000
Bm5188 Brugia malayi Bm5188 N 0.000
CapteG6193 Capitella teleta CapteG6193 N 0.000
CLEC002616 Cimex lectularius CLEC002616 N 0.000
CLEC013163 Cimex lectularius CLEC013163 I 0.000
CPIJ001077 Culex quinquefasciatus CPIJ001077 I 0.000
CPIJ001377 Culex quinquefasciatus CPIJ001377 N 0.000
CpipJ_CPIJ001077 Culex pipiens CpipJ_CPIJ001077 I 0.000
CpipJ_CPIJ001377 Culex pipiens CpipJ_CPIJ001377 N 0.000
D917_05078 Trichinella nativa D917_05078 N 0.000
D917_08408 Trichinella nativa D917_08408 N 0.000
DICVIV_02945 Dictyocaulus viviparus DICVIV_02945 N 0.000
ECPE_0000358001 Echinostoma caproni ECPE_0000358001 N 0.000
ENSAPLG00000005538 Anas platyrhynchos ENSAPLG00000005538 I 0.000
ENSECAG00000018325 Equus caballus ENSECAG00000018325 I 0.000
ENSMEUG00000009353 Macropus eugenii ENSMEUG00000009353 I 0.000
ENSMICG00000006922 Microcebus murinus ENSMICG00000006922 I 0.000
ENSOANG00000006212 Ornithorhynchus anatinus ENSOANG00000006212 I 0.000
ENSOARG00000007317 Ovis aries ENSOARG00000007317 N 0.000
ENSPFOG00000002761 Poecilia formosa ENSPFOG00000002761 I 0.000
ENSSHAG00000002937 Sarcophilus harrisii ENSSHAG00000002937 I 0.000
EVEC_0000660801 Enterobius vermicularis EVEC_0000660801 N 0.000
fgenesh2_pg.scaffold_205000001 Branchiostoma floridae fgenesh2_pg.scaffold_205000001 I 0.000
Gfo_R008628 Geospiza fortis Gfo_R008628 I 0.000
HHAL002696-PA Halyomorpha halys HHAL002696-PA I 0.000
HHAL007703-PA Halyomorpha halys HHAL007703-PA N 0.000
Hsal_06171--XP_001121097.1_APIME Harpegnathos saltator Hsal_06171--XP_001121097.1_APIME N 0.000
ISCW002094 Ixodes scapularis ISCW002094 I 0.000
ISCW014430 Ixodes scapularis ISCW014430 N 0.000
KGM_13904 Danaus plexippus KGM_13904 N 0.000
LCUP008694 Lucilia cuprina LCUP008694 N 0.000
LCUP012257 Lucilia cuprina LCUP012257 I 0.000
LDEC017209 Leptinotarsa decemlineata LDEC017209 N 0.000
MCINX004710 Melitaea cinxia MCINX004710 N 0.000
Myotis_brandtii_NKX6_10030510 Myotis brandtii Myotis_brandtii_NKX6_10030510 N 0.000
NKX6-1 Choloepus hoffmanni ENSCHOG00000005454 I 0.000
NKX6-1 Sus scrofa ENSSSCG00000009232 I 0.000
NKX6-2 Procavia capensis ENSPCAG00000000708 N 0.000
nLs.2.1.2.g06018 Litomosoides sigmodontis nLs.2.1.2.g06018 N 0.000
nOo.2.0.1.g02038 Onchocerca ochengi nOo.2.0.1.g02038 I 0.000
nRc.2.0.1.g06912 Romanomermis culicivorax nRc.2.0.1.g06912 N 0.000
Ocbimv22025901m.g Octopus bimaculoides Ocbimv22025901m.g N 0.000
OFLC_0001516501 Onchocerca flexuosa OFLC_0001516501 N 0.000
PEQ_0000511901 Parascaris equorum PEQ_0000511901 I 0.000
PHUM359870 Pediculus humanus PHUM359870 N 0.000
Ppa-cog-1 Pristionchus pacificus PPA04716 N 0.000
PPAI007703 Phlebotomus papatasi PPAI007703 N 0.000
PXEA_0000446101 Protopolystoma xenopodis PXEA_0000446101 N 0.000
RPRC003712 Rhodnius prolixus RPRC003712 I 0.000
scaffold37-EXSNAP2012.8 Pristionchus exspectatus scaffold37-EXSNAP2012.8 N 0.000
SCUD_0002097601 Schistosoma curassoni SCUD_0002097601 N 0.000
SINV25324 Solenopsis invicta SINV25324 I 0.000
Sjc_0111830 Schistosoma japonicum Sjc_0111830 N 0.000
SROB_0001257001 Schistosoma rodhaini SROB_0001257001 N 0.000
TCNE_0001839401 Toxocara canis TCNE_0001839401 N 0.000
TELCIR_00305 Teladorsagia circumcincta TELCIR_00305 N 0.000
TRE_0000644601 Trichobilharzia regenti TRE_0000644601 N 0.000
WUBG_08661 Wuchereria bancrofti WUBG_08661 N 0.000
YQE_09155 Dendroctonus ponderosae YQE_09155 N 0.000