CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPAG_04303
(
Candida parapsilosis
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
CPAG_04303
T239490_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.407
0.646
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.407
0.646
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.407
0.646
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.407
0.646
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.407
0.646
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.407
0.646
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.407
0.646
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.407
0.646
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.407
0.646
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.407
0.646
HSF1
M10878_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.407
0.646
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPAG_04303.1
HSF
192
298
FVMKIWSMVNDKSNDEYIRWNEDGRTFQVFKREDFVHKILPAYFKHQNMSSFVRQLNMYGFHKVQDITNGTLYPNDDKSGGDEVWQFENPNFIRGREDLLDNIVRNK
Links
Other
HSF
family TFs
Other
Candida parapsilosis
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29842.m003700
Ricinus communis
29842.m003700
N
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
Bo1g024080
Brassica oleracea
Bo1g024080
I
Bo3g162600
Brassica oleracea
Bo3g162600
I
Bostr.10689s0082
Boechera stricta
Bostr.10689s0082
I
Bra013519
Brassica rapa
Bra013519
I
Cagra.1062s0003
Capsella grandiflora
Cagra.1062s0003
I
Carubv10007380m.g
Capsella rubella
Carubv10007380m.g
I
cassava15938.m1
Manihot esculenta
cassava15938.m1
N
Ca_22008
Cicer arietinum
Ca_22008
N
chr4.CM1616.440.nc
Lotus japonicus
chr4.CM1616.440.nc
I
DYT1
Arabidopsis thaliana
AT4G21330
D
DYT1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7001824
I
GLYMA13G32370
Glycine max
GLYMA13G32370
I
GLYMA15G06950
Glycine max
GLYMA15G06950
I
Gorai.011G019900
Gossypium raimondii
Gorai.011G019900
N
LjT46I09.60.nd
Lotus japonicus
LjT46I09.60.nd
I
orange1.1g042649m.g
Citrus sinensis
orange1.1g042649m.g
I
Thhalv10027186m.g
Eutrema salsugineum
Thhalv10027186m.g
I