IRF5 (Callithrix jacchus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCJAG00000018061 T243983_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.981 0.981
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.981 0.981
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.981 0.981
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.981 0.981
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.981 0.981
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.981 0.981
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.981 0.981
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.981 0.981
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.971 0.971
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.724 0.724
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.724 0.724
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.724 0.724
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000033375 IRF 16 121
ENSCJAP00000033378 IRF 16 121
ENSCJAP00000033393 IRF 16 121
ENSCJAP00000033401 IRF 16 121
ENSCJAP00000033403 IRF 16 121
ENSCJAP00000044065 IRF 16 121

Links

Other IRF family TFs
Other Callithrix jacchus TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28779.m000140 Ricinus communis 28779.m000140 I
AT1G19490 Arabidopsis thaliana AT1G19490 D
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I
Carubv10011417m.g Capsella rubella Carubv10011417m.g I
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I
Cla017983 Citrullus lanatus Cla017983 I
Cucsa.240980 Cucumis sativus Cucsa.240980 I
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I
GLYMA03G35101 Glycine max GLYMA03G35101 I
GLYMA19G37801 Glycine max GLYMA19G37801 I
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I
Lus10003255.g Linum usitatissimum Lus10003255.g I
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I
TCM_022516 Theobroma cacao TCM_022516 I
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I