ENSSSCG00000025716 (Sus scrofa)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSSSCG00000025716 T244394_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.712 0.712
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.712 0.712
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.712 0.712
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.712 0.712
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.712 0.712
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.712 0.712
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.712 0.712
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.712 0.712
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.712 0.712
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.712 0.712
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.712 0.712
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.712 0.712
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000022555 IRF 1 60

Links

Other IRF family TFs
Other Sus scrofa TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.000
Bo6g022330 Brassica oleracea Bo6g022330 N 0.000
Bo7g030310 Brassica oleracea Bo7g030310 N 0.000
Bo7g089080 Brassica oleracea Bo7g089080 N 0.000
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.000
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.000
Bra018860 Brassica rapa Bra018860 N 0.000
Bra020715 Brassica rapa Bra020715 N 0.000
Bra037509 Brassica rapa Bra037509 N 0.000
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.000
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.000
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.000
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
Ca_13855 Cicer arietinum Ca_13855 N 0.000
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.000
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.000
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.000
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.000
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.000
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.000
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.000
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.000
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.000
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.000
MDP0000205236 Malus domestica MDP0000205236 N 0.000
MDP0000284679 Malus domestica MDP0000284679 N 0.000
MDP0000804652 Malus domestica MDP0000804652 N 0.000
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.000
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.000
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.000
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.000
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.000
PAT1 Arabidopsis thaliana AT5G48150 N 0.000
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.000
PK09018.1 Cannabis sativa PK09018.1 N 0.000
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.000
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.000
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.000
SCL21 Arabidopsis thaliana AT2G04890 N 0.000
SCL5 Arabidopsis thaliana AT1G50600 N 0.000
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.000
Si029156m.g Setaria italica Si029156m.g N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.000
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.000
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.000
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.000
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.000
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.000