Ciclev10032862m.g (Citrus clementina)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ciclev10032862m.g T246826_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032862m LOB 23 121

Links

Other LOB family TFs
Other Citrus clementina TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000742 Ricinus communis 29814.m000742 N 0.899
Bo5g136860 Brassica oleracea Bo5g136860 N 0.788
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.818
Bra034867 Brassica rapa Bra034867 N 0.788
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.818
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.818
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.899
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.939
Ca_12464 Cicer arietinum Ca_12464 N 0.859
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.859
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.899
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.939
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.707
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.919
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.879
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.899
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.899
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.899
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.909
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.707
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.939
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.909
LBD21 Arabidopsis thaliana AT3G11090 N 0.818
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.818
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.919
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.899
MDP0000220708 Malus domestica MDP0000220708 N 0.879
MDP0000943252 Malus domestica MDP0000943252 N 0.889
mgf019866m Mimulus guttatus mgf019866m N 0.828
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.838
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.879
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 1.000
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.818
Pm018957 Prunus mume Pm018957 N 0.939
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.899
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.919
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.939
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.899
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.899
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.818
TCM_042466 Theobroma cacao TCM_042466 N 0.919
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.818