evm.TU.contig_38122.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_38122.1 T258110_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_38122.1 MADS box 17 63

Links

Other MADS box family TFs
Other Carica papaya TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.702
evm.TU.contig_26687.1 Carica papaya evm.TU.contig_26687.1 N 0.872
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.936
evm.TU.contig_28241.3 Carica papaya evm.TU.contig_28241.3 N 0.894
evm.TU.contig_30005.1 Carica papaya evm.TU.contig_30005.1 N 0.854
evm.TU.contig_31285.2 Carica papaya evm.TU.contig_31285.2 N 0.896
evm.TU.contig_31965.2 Carica papaya evm.TU.contig_31965.2 N 0.957
evm.TU.contig_34259 Carica papaya evm.TU.contig_34259 N 0.915
evm.TU.contig_34792.1 Carica papaya evm.TU.contig_34792.1 N 0.872
evm.TU.contig_35176.1 Carica papaya evm.TU.contig_35176.1 N 0.894
evm.TU.contig_37047 Carica papaya evm.TU.contig_37047 N 0.812
evm.TU.contig_38329 Carica papaya evm.TU.contig_38329 N 0.915
evm.TU.contig_41894.2 Carica papaya evm.TU.contig_41894.2 N 0.875
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.915
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.936
evm.TU.supercontig_2423.2 Carica papaya evm.TU.supercontig_2423.2 N 0.936
evm.TU.supercontig_347.13 Carica papaya evm.TU.supercontig_347.13 N 0.896
evm.TU.supercontig_347.4 Carica papaya evm.TU.supercontig_347.4 N 0.872
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.723
evm.TU.supercontig_439.3 Carica papaya evm.TU.supercontig_439.3 N 0.854
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.854
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.702
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.714
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.702
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.723