evm.TU.contig_34259 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_34259 T258079_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_34259.1 MADS box 17 64

Links

Other MADS box family TFs
Other Carica papaya TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_38329 Carica papaya evm.TU.contig_38329 N 1.000
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.979
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.979
evm.TU.contig_31285.2 Carica papaya evm.TU.contig_31285.2 N 0.958
evm.TU.supercontig_347.13 Carica papaya evm.TU.supercontig_347.13 N 0.958
evm.TU.contig_28241.3 Carica papaya evm.TU.contig_28241.3 N 0.938
evm.TU.contig_35176.1 Carica papaya evm.TU.contig_35176.1 N 0.938
evm.TU.contig_41894.2 Carica papaya evm.TU.contig_41894.2 N 0.938
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.938
evm.TU.supercontig_2423.2 Carica papaya evm.TU.supercontig_2423.2 N 0.936
evm.TU.contig_26687.1 Carica papaya evm.TU.contig_26687.1 N 0.917
evm.TU.contig_30005.1 Carica papaya evm.TU.contig_30005.1 N 0.917
evm.TU.contig_34792.1 Carica papaya evm.TU.contig_34792.1 N 0.917
evm.TU.supercontig_347.4 Carica papaya evm.TU.supercontig_347.4 N 0.917
evm.TU.supercontig_439.3 Carica papaya evm.TU.supercontig_439.3 N 0.917
evm.TU.contig_38122.1 Carica papaya evm.TU.contig_38122.1 N 0.915
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.896
evm.TU.contig_37047 Carica papaya evm.TU.contig_37047 N 0.875
evm.TU.contig_31965.2 Carica papaya evm.TU.contig_31965.2 N 0.872
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.714
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708