CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra006718
(
Brassica rapa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bra006718
T259948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra006718.1-P
MBD
24
128
RKRSAPLDNWLPDGWRVEDKVRTSGAKAGSVDKYYYEPVTGRRFRSRTEVLYYLEHGTSKKGSKKADFNPDHLEGQGRNKSSRKAKEQPPRPLNFDFENAPEKLS
Links
Other
MBD
family TFs
Other
Brassica rapa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra031213
Brassica rapa
Bra031213
N
Carubv10022802m.g
Capsella rubella
Carubv10022802m.g
N
Ciclev10028120m.g
Citrus clementina
Ciclev10028120m.g
N
MTERF2
Arabidopsis thaliana
AT2G21710
N
orange1.1g008728m.g
Citrus sinensis
orange1.1g008728m.g
N
TCM_006888
Theobroma cacao
TCM_006888
N
Thhalv10000085m.g
Eutrema salsugineum
Thhalv10000085m.g
N