ENSAMXG00000017952 (Astyanax mexicanus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSAMXG00000017952 T260051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.805 0.805
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000018500 MBD 4 40
ENSAMXP00000018500 MBD 40 114
ENSAMXP00000018501 MBD 1 146

Links

Other MBD family TFs
Other Astyanax mexicanus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011698 Calypte anna Aan_R011698 N 0.739
Afo_R010057 Aptenodytes forsteri Afo_R010057 N 0.896
Alligator_sinensis_CCG000430.1 Alligator sinensis Alligator_sinensis_CCG000430.1 N 0.722
Brh_R003386 Buceros rhinoceros Brh_R003386 N 0.896
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.805
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.885
ENSAMXG00000006553 Astyanax mexicanus ENSAMXG00000006553 N 0.714
ENSAPLG00000003384 Anas platyrhynchos ENSAPLG00000003384 N 0.909
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.805
ENSCHOG00000012250 Choloepus hoffmanni ENSCHOG00000012250 N 0.857
ENSCSAG00000011976 Chlorocebus sabaeus ENSCSAG00000011976 N 0.819
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.805
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.805
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.753
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.847
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.805
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.779
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.948
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.817
ENSMPUG00000008045 Mustela putorius furo ENSMPUG00000008045 N 0.764
ENSNLEG00000001734 Nomascus leucogenys ENSNLEG00000001734 N 0.819
ENSOANG00000030623 Ornithorhynchus anatinus ENSOANG00000030623 I 0.701
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.805
ENSOARG00000012359 Ovis aries ENSOARG00000012359 I 0.909
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.727
ENSP00000156825 Macaca fascicularis ENSP00000156825 N 0.922
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.805
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.805
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.922
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.826
ENSSHAG00000013346 Sarcophilus harrisii ENSSHAG00000013346 N 0.909
ENSSTOG00000015870 Ictidomys tridecemlineatus ENSSTOG00000015870 N 0.778
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.727
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.740
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.779
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.857
Gfo_R007597 Geospiza fortis Gfo_R007597 N 0.739
MBD2 Tursiops truncatus ENSTTRG00000009635 N 0.806
Mbd2 Mus musculus ENSMUSG00000024513 D 0.806
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.805
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.792
MBD2 Microcebus murinus ENSMICG00000008970 I 0.805
MBD2 Homo sapiens ENSG00000134046 D 0.817
MBD2 Pteropus vampyrus ENSPVAG00000008555 N 0.764
MBD2 Sus scrofa ENSSSCG00000004528 I 0.805
MBD3 Cavia porcellus ENSCPOG00000026210 N 0.819
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.909
MBD3 Canis familiaris ENSCAFG00000019503 N 0.787
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.947
MBD3 Pan troglodytes ENSPTRG00000010209 N 0.819
MBD3 Gorilla gorilla ENSGGOG00000012396 N 0.917
MBD3 Meleagris gallopavo ENSMGAG00000002493 N 0.909
MBD3 Homo sapiens ENSG00000071655 N 0.922
MBD3 Macaca mulatta ENSMMUG00000009014 N 0.819
MBD3 Monodelphis domestica ENSMODG00000004125 N 0.909
MBD3 Felis catus ENSFCAG00000000763 I 0.896
Mbd3 Mus musculus ENSMUSG00000035478 N 0.909
MBD3 Equus caballus ENSECAG00000015485 I 0.821
Mbd3 Dipodomys ordii ENSDORG00000004743 N 0.806
MBD3 Otolemur garnettii ENSOGAG00000024563 N 0.789
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.883
MBD3 Oryzias latipes ENSORLG00000004850 N 0.903
MBD3 Procavia capensis ENSPCAG00000006257 N 0.722
Mbd3 Rattus norvegicus ENSRNOG00000028956 N 0.909
mbd3.S Xenopus laevis XB-GENE-491557 I 0.922
mbd3a Danio rerio ENSDARG00000061774 I 0.922
mbd3b Danio rerio ENSDARG00000042029 I 0.974
Myotis_brandtii_MBD3_10015627 Myotis brandtii Myotis_brandtii_MBD3_10015627 N 0.758
Ogr00377 Ophisaurus gracilis Ogr00377 N 0.931
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.792
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.805
Tal_R008196 Tyto alba Tal_R008196 N 0.896