Ppa-met-2 (Pristionchus pacificus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 PPA14437 T260889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA14437 MBD 463 537

Links

Other MBD family TFs
Other Pristionchus pacificus TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I
Aquca_038_00198 Aquilegia coerulea Aquca_038_00198 I
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I
AtMYB9 Arabidopsis thaliana AT5G16770 I
AtMYB9 Arabidopsis lyrata fgenesh2_kg.6__1669__AT5G16770.1 I
BGIOSGA003345 Oryza indica BGIOSGA003345 I
BGIOSGA010900 Oryza indica BGIOSGA010900 I
Bo3g012180 Brassica oleracea Bo3g012180 I
Bo3g039690 Brassica oleracea Bo3g039690 I
Bo4g004500 Brassica oleracea Bo4g004500 I
Bo5g156410 Brassica oleracea Bo5g156410 I
Bo7g092680 Brassica oleracea Bo7g092680 I
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I
Bostr.1460s0105 Boechera stricta Bostr.1460s0105 I
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I
Bostr.2618s0017 Boechera stricta Bostr.2618s0017 I
Bra000453 Brassica rapa Bra000453 I
Bra006055 Brassica rapa Bra006055 I
Bra006370 Brassica rapa Bra006370 I
Bra008596 Brassica rapa Bra008596 I
Bra036145 Brassica rapa Bra036145 I
Bra037419 Brassica rapa Bra037419 I
Bra039142 Brassica rapa Bra039142 I
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I
Cagra.0434s0044 Capsella grandiflora Cagra.0434s0044 I
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I
Carubv10002573m.g Capsella rubella Carubv10002573m.g I
Carubv10013887m.g Capsella rubella Carubv10013887m.g I
Carubv10019345m.g Capsella rubella Carubv10019345m.g I
Carubv10024801m.g Capsella rubella Carubv10024801m.g I
Carubv10026694m.g Capsella rubella Carubv10026694m.g I
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I
cassava24925.valid.m1 Manihot esculenta cassava24925.valid.m1 I
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I
cassava40469.m1 Manihot esculenta cassava40469.m1 I
Ca_03498 Cicer arietinum Ca_03498 I
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I
Cla009418 Citrullus lanatus Cla009418 I
Cla010483 Citrullus lanatus Cla010483 I
Cla017646 Citrullus lanatus Cla017646 I
Cla022107 Citrullus lanatus Cla022107 I
Cucsa.069500 Cucumis sativus Cucsa.069500 I
Cucsa.158170 Cucumis sativus Cucsa.158170 I
Cucsa.252700 Cucumis sativus Cucsa.252700 I
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I
e_gw1.389.9.1 Physcomitrella patens e_gw1.389.9.1 I
F775_11235 Aegilops tauschii F775_11235 I
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I
gene12564-v1.0-hybrid Fragaria vesca gene12564-v1.0-hybrid I
GLYMA02G01740 Glycine max GLYMA02G01740 I
GLYMA03G37640 Glycine max GLYMA03G37640 I
GLYMA07G37142 Glycine max GLYMA07G37142 I
GLYMA09G04370 Glycine max GLYMA09G04370 I
GLYMA10G01801 Glycine max GLYMA10G01801 I
GLYMA15G15400 Glycine max GLYMA15G15400 I
GLYMA17G03480 Glycine max GLYMA17G03480 I
GLYMA19G40250 Glycine max GLYMA19G40250 I
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I
GRMZM2G022686 Zea mays GRMZM2G022686 I
GRMZM2G051256 Zea mays GRMZM2G051256 I
GRMZM2G051528 Zea mays GRMZM2G051528 I
GRMZM2G057027 Zea mays GRMZM2G057027 I
GRMZM2G084799 Zea mays GRMZM2G084799 I
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I
LPERR03G12690 Leersia perrieri LPERR03G12690 I
LPERR06G07150 Leersia perrieri LPERR06G07150 I
Lus10001458.g Linum usitatissimum Lus10001458.g I
Lus10002435.g Linum usitatissimum Lus10002435.g I
Lus10016855.g Linum usitatissimum Lus10016855.g I
Lus10027459.g Linum usitatissimum Lus10027459.g I
Lus10039214.g Linum usitatissimum Lus10039214.g I
MDP0000119725 Malus domestica MDP0000119725 I
MDP0000574942 Malus domestica MDP0000574942 I
MDP0000607330 Malus domestica MDP0000607330 I
MDP0000716457 Malus domestica MDP0000716457 I
mgf012733m Mimulus guttatus mgf012733m I
mgf024278m Mimulus guttatus mgf024278m I
MLOC_57220 Hordeum vulgare MLOC_57220 I
MTR_2g034790 Medicago truncatula MTR_2g034790 I
MTR_4g082290 Medicago truncatula MTR_4g082290 I
MTR_4g121460 Medicago truncatula MTR_4g121460 I
MTR_7g011170 Medicago truncatula MTR_7g011170 I
MTR_7g109320 Medicago truncatula MTR_7g109320 I
MYB106 Arabidopsis thaliana AT3G01140 D
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I
MYB11 Arabidopsis thaliana AT3G62610 I
MYB111 Arabidopsis thaliana AT5G49330 D
MYB111 Arabidopsis lyrata scaffold_801313.1 I
MYB12 Arabidopsis thaliana AT2G47460 I
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I
OB01G22640 Oryza brachyantha OB01G22640 I
OB02G39890 Oryza brachyantha OB02G39890 I
OB03G24320 Oryza brachyantha OB03G24320 I
OB06G17320 Oryza brachyantha OB06G17320 I
OBART02G32900 Oryza barthii OBART02G32900 I
OBART03G14380 Oryza barthii OBART03G14380 I
OBART06G07710 Oryza barthii OBART06G07710 I
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I
OMERI02G31500 Oryza meridionalis OMERI02G31500 I
OMERI03G13130 Oryza meridionalis OMERI03G13130 I
OMERI06G09300 Oryza meridionalis OMERI06G09300 I
ONIVA02G35050 Oryza nivara ONIVA02G35050 I
ONIVA03G15280 Oryza nivara ONIVA03G15280 I
ONIVA06G08940 Oryza nivara ONIVA06G08940 I
OPUNC02G30360 Oryza punctata OPUNC02G30360 I
OPUNC03G13890 Oryza punctata OPUNC03G13890 I
OPUNC06G07380 Oryza punctata OPUNC06G07380 I
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I
OS01G0305900 Oryza sativa OS01G0305900 I
OS06G0221000 Oryza sativa OS06G0221000 I
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I
PK06182.1 Cannabis sativa PK06182.1 D
PK16958.1 Cannabis sativa PK16958.1 I
Pm008294 Prunus mume Pm008294 I
Pm019588 Prunus mume Pm019588 I
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I
Sb01g037670 Sorghum bicolor Sb01g037670 I
Sb03g012550 Sorghum bicolor Sb03g012550 I
Si002107m.g Setaria italica Si002107m.g I
Si017785m.g Setaria italica Si017785m.g I
Si039538m.g Setaria italica Si039538m.g I
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I
TCM_004777 Theobroma cacao TCM_004777 I
TCM_011659 Theobroma cacao TCM_011659 I
TCM_021317 Theobroma cacao TCM_021317 I
TCM_021318 Theobroma cacao TCM_021318 I
TCM_037555 Theobroma cacao TCM_037555 I
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I
Thhalv10014050m.g Eutrema salsugineum Thhalv10014050m.g I
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I
TRIUR3_05136 Triticum urartu TRIUR3_05136 I
TRIUR3_23397 Triticum urartu TRIUR3_23397 I
TRIUR3_31689 Triticum urartu TRIUR3_31689 I
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I