Cucsa.252700 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.252700 T284478_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.785 0.882
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.763 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.252700.1 Myb 14 61
Cucsa.252700.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla022107 Citrullus lanatus Cla022107 I 0.856
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.821
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.814
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.812
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.812
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.811
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.809
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.809
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.809
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.805
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.805
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.802
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.802
MDP0000119725 Malus domestica MDP0000119725 I 0.799
MDP0000607330 Malus domestica MDP0000607330 I 0.799
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.796
TCM_021318 Theobroma cacao TCM_021318 I 0.795
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.794
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.793
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.793
TCM_004777 Theobroma cacao TCM_004777 I 0.793
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.791
Cla017646 Citrullus lanatus Cla017646 I 0.791
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.790
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.789
Si002107m.g Setaria italica Si002107m.g I 0.789
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.789
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.789
Si039538m.g Setaria italica Si039538m.g I 0.788
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.788
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.788
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.788
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.787
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.787
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.786
MYB111 Arabidopsis thaliana AT5G49330 D 0.785
Bo7g092680 Brassica oleracea Bo7g092680 I 0.785
Bra037419 Brassica rapa Bra037419 I 0.785
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.785
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.785
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.785
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.785
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.785
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.785
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.784
Ca_03498 Cicer arietinum Ca_03498 I 0.783
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.783
F775_11235 Aegilops tauschii F775_11235 I 0.782
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.782
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.782
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.782
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.782
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.780
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.780
Pm008294 Prunus mume Pm008294 I 0.779
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.778
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.778
MYB12 Arabidopsis thaliana AT2G47460 I 0.777
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.777
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.776
Bo3g039690 Brassica oleracea Bo3g039690 I 0.773
Bra000453 Brassica rapa Bra000453 I 0.773
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.773
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.773
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.773
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.773
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.773
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.770
Cla009418 Citrullus lanatus Cla009418 I 0.768
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.768
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.767
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.767
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.767
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.766
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.765
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.764
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.764
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.764
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.763
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.763
PK06182.1 Cannabis sativa PK06182.1 D 0.763
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.762
Bra036145 Brassica rapa Bra036145 I 0.761
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.761
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.760
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.759
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.757
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.757
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.757
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.756
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.755
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.755
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.754
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.753
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.752
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.752
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.751
PK16958.1 Cannabis sativa PK16958.1 I 0.750
TCM_037555 Theobroma cacao TCM_037555 I 0.749
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.747
OBART03G14380 Oryza barthii OBART03G14380 I 0.747
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.747
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.747
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.747
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.741
Bo4g004500 Brassica oleracea Bo4g004500 I 0.740
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.738
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.736
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.735
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.734
mgf024278m Mimulus guttatus mgf024278m I 0.732
TCM_021317 Theobroma cacao TCM_021317 I 0.730
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.729
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.728
OB01G22640 Oryza brachyantha OB01G22640 I 0.726
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.718
mgf003233m Mimulus guttatus mgf003233m I 0.717
OB03G24320 Oryza brachyantha OB03G24320 I 0.716
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.716
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.716
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.715
TCM_010778 Theobroma cacao TCM_010778 I 0.714
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.709
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.706
F775_18434 Aegilops tauschii F775_18434 I 0.705
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.704
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.704
Pm005570 Prunus mume Pm005570 I 0.704
Pm020104 Prunus mume Pm020104 I 0.704
MDP0000031172 Malus domestica MDP0000031172 I 0.704
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.704
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.703
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.703
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.703
OS01G0305900 Oryza sativa OS01G0305900 I 0.703
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.703
TCM_004509 Theobroma cacao TCM_004509 I 0.701
TCM_037376 Theobroma cacao TCM_037376 I 0.701
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.701
mgf012733m Mimulus guttatus mgf012733m I 0.701
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.701
MDP0000210851 Malus domestica MDP0000210851 I 0.701
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.700
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.700
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.699
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.699
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.697
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.697
30068.m002544 Ricinus communis 30068.m002544 I 0.696
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.694
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.693
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.692
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.691
Eucgr.K00077 Eucalyptus grandis Eucgr.K00077 I 0.689
MYB11 Arabidopsis thaliana AT3G62610 I 0.688
GSMUA_AchrUn_randomG28780_001 Musa acuminata GSMUA_AchrUn_randomG28780_001 I 0.688
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.687
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.687
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.686
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.684
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.683
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.683
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.683
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.681
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.681
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.681
F775_21522 Aegilops tauschii F775_21522 I 0.680
Cla011528 Citrullus lanatus Cla011528 I 0.680
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.679
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.679
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.679
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.679
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.679
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.679
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.679
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.678
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.678
TCM_011660 Theobroma cacao TCM_011660 I 0.677
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.677
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.676
GRMZM2G041415 Zea mays GRMZM2G041415 I 0.675
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.675
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.675
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.675
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.675
MYB8 Arabidopsis thaliana AT1G35515 I 0.674
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.674
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.674
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.674
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.672
Pm018338 Prunus mume Pm018338 I 0.672
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.672
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.671
Ca_03154 Cicer arietinum Ca_03154 I 0.671
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.671
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.671
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.671
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.670
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.670
GRMZM2G050305 Zea mays GRMZM2G050305 I 0.670
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.670
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.670
TCM_037379 Theobroma cacao TCM_037379 I 0.670
TCM_037559 Theobroma cacao TCM_037559 I 0.670
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.670
OB06G16110 Oryza brachyantha OB06G16110 I 0.669
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.669
MDP0000915330 Malus domestica MDP0000915330 I 0.669
PK14784.1 Cannabis sativa PK14784.1 I 0.669
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.668
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.668
GRMZM2G084583 Zea mays GRMZM2G084583 I 0.668
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.668
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.668
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.668
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.668
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.668
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.668
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.668
Bo3g044210 Brassica oleracea Bo3g044210 I 0.667
Bra000680 Brassica rapa Bra000680 I 0.667
TCM_025488 Theobroma cacao TCM_025488 I 0.666
cassava34465.m1 Manihot esculenta cassava34465.m1 I 0.666
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.666
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.666
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.666
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.666
Pm025102 Prunus mume Pm025102 I 0.665
MDP0000157940 Malus domestica MDP0000157940 I 0.665
Ca_11228 Cicer arietinum Ca_11228 I 0.664
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.664
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.663
TCM_000535 Theobroma cacao TCM_000535 I 0.663
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.662
OPUNC06G07380 Oryza punctata OPUNC06G07380 I 0.662
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.662
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.662
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.662
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.662
Pm005571 Prunus mume Pm005571 I 0.662
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.662
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.662
Bra010736 Brassica rapa Bra010736 I 0.661
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.661
cassava24925.valid.m1 Manihot esculenta cassava24925.valid.m1 I 0.661
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.661