Lus10002435.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10002435.g T287863_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.714 0.742
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.701 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002435 Myb 14 61
Lus10002435 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.872
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.799
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.786
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.786
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.781
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.780
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.780
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.777
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.777
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.772
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.771
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.769
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.768
TCM_021318 Theobroma cacao TCM_021318 I 0.767
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.766
Cla017646 Citrullus lanatus Cla017646 I 0.765
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.762
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.761
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.759
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.759
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.757
MDP0000119725 Malus domestica MDP0000119725 I 0.757
MDP0000607330 Malus domestica MDP0000607330 I 0.757
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.757
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.756
PK16958.1 Cannabis sativa PK16958.1 I 0.756
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.754
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.754
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.753
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.753
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.752
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.752
Cla009418 Citrullus lanatus Cla009418 I 0.750
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.747
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.747
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.747
Pm008294 Prunus mume Pm008294 I 0.747
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.744
Cla022107 Citrullus lanatus Cla022107 I 0.744
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.742
TCM_004777 Theobroma cacao TCM_004777 I 0.740
Bo7g092680 Brassica oleracea Bo7g092680 I 0.738
Bra000453 Brassica rapa Bra000453 I 0.738
Bra037419 Brassica rapa Bra037419 I 0.738
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.738
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.738
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.738
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.738
mgf024278m Mimulus guttatus mgf024278m I 0.737
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.736
MYB12 Arabidopsis thaliana AT2G47460 I 0.734
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.734
Ca_03498 Cicer arietinum Ca_03498 I 0.734
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.733
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.733
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.731
Bra036145 Brassica rapa Bra036145 I 0.729
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.729
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.729
Bo4g004500 Brassica oleracea Bo4g004500 I 0.728
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.728
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.724
Bo3g039690 Brassica oleracea Bo3g039690 I 0.723
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.723
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.723
F775_11235 Aegilops tauschii F775_11235 I 0.721
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.721
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.721
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.721
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.721
Si039538m.g Setaria italica Si039538m.g I 0.721
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.721
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.721
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.721
mgf003233m Mimulus guttatus mgf003233m I 0.721
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.721
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.721
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.720
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.718
TCM_037555 Theobroma cacao TCM_037555 I 0.718
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.716
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.716
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.716
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.716
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.716
TCM_021317 Theobroma cacao TCM_021317 I 0.716
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.715
MYB111 Arabidopsis thaliana AT5G49330 D 0.714
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.714
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.713
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.713
mgf012733m Mimulus guttatus mgf012733m I 0.710
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.710
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.710
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.709
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.709
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.709
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.707
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.707
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.707
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.707
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.706
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.706
Si002107m.g Setaria italica Si002107m.g I 0.706
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.705
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.705
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.704
OBART03G14380 Oryza barthii OBART03G14380 I 0.704
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.704
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.704
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.704
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.703
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.703
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.703
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.703
PK06182.1 Cannabis sativa PK06182.1 D 0.701
F775_18434 Aegilops tauschii F775_18434 I 0.700
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.700
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.698
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.696
30068.m002544 Ricinus communis 30068.m002544 I 0.696
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.696
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.693
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.689
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.686
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.683
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.683
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.681
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.681
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.681
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.681
Pm020104 Prunus mume Pm020104 I 0.680
MYB11 Arabidopsis thaliana AT3G62610 I 0.679
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.679
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.679
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.679
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.679
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.679
Pm005571 Prunus mume Pm005571 I 0.677
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.676
F775_21522 Aegilops tauschii F775_21522 I 0.675
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.675
GSMUA_Achr8G32480_001 Musa acuminata GSMUA_Achr8G32480_001 I 0.675
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.675
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.675
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.675
TCM_010778 Theobroma cacao TCM_010778 I 0.674
OB03G24320 Oryza brachyantha OB03G24320 I 0.673
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.672
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.670
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.670
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.670
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.670
TCM_037376 Theobroma cacao TCM_037376 I 0.670
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.670
Pm005570 Prunus mume Pm005570 I 0.670
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.670
MDP0000031172 Malus domestica MDP0000031172 I 0.670
MDP0000210851 Malus domestica MDP0000210851 I 0.670
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.670
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.668
OB06G16110 Oryza brachyantha OB06G16110 I 0.667
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.666
Pm018338 Prunus mume Pm018338 I 0.666
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.666
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.666
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.666
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.666
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.666
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.666
MDP0000157940 Malus domestica MDP0000157940 I 0.666
MDP0000915330 Malus domestica MDP0000915330 I 0.666
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.666
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.666
PK14784.1 Cannabis sativa PK14784.1 I 0.666
F775_42516 Aegilops tauschii F775_42516 I 0.665
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.665
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.664
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.664
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.662
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.661
TCM_004509 Theobroma cacao TCM_004509 I 0.661
Pm025102 Prunus mume Pm025102 I 0.661
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.661
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.661