Gorai.009G016600 (Gossypium raimondii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Gorai.009G016600 T261521_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G016600.1 MBD 14 87

Links

Other MBD family TFs
Other Gossypium raimondii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.726
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.743
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.743
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.732
Ca_06682 Cicer arietinum Ca_06682 N 0.767
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.730
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.724
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.714
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.797
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.740
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.730
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.730
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.716
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.716
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.730
MDP0000152128 Malus domestica MDP0000152128 N 0.770
MDP0000301302 Malus domestica MDP0000301302 N 0.707
MDP0000375866 Malus domestica MDP0000375866 N 0.757
MDP0000574053 Malus domestica MDP0000574053 N 0.770
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.757
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.703
PK04144.1 Cannabis sativa PK04144.1 N 0.757
Pm027560 Prunus mume Pm027560 N 0.767
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.759
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.781
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.726
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.740
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.703
TCM_038107 Theobroma cacao TCM_038107 N 0.838
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.730