AMTR_s00007p00193000 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00007p00193000 T266140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.811 0.848
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.762 0.804
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.705 0.826
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.704 0.783
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.704 0.783
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.704 0.783
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.704 0.783
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.689 0.696
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.689 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05352 Myb 35 86

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI06326 Xenopus laevis AAI06326 I
Aan_R003641 Calypte anna Aan_R003641 I
Aan_R009566 Calypte anna Aan_R009566 I
AAP78771 Xenopus laevis AAP78771 I
Afo_R006827 Aptenodytes forsteri Afo_R006827 I
Afo_R010616 Aptenodytes forsteri Afo_R010616 I
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I
Brh_R004848 Buceros rhinoceros Brh_R004848 I
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I
ENSP00000257915 Macaca fascicularis ENSP00000257915 I
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I
Gfo_R001211 Geospiza fortis Gfo_R001211 I
Gfo_R015659 Geospiza fortis Gfo_R015659 I
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I
Ogr17000 Ophisaurus gracilis Ogr17000 I
pou6f1 Takifugu rubripes ENSTRUG00000014900 I
Pvit_06471 Pogona vitticeps Pvit_06471 I
Pvit_07455 Pogona vitticeps Pvit_07455 I
Pvit_12019 Pogona vitticeps Pvit_12019 I
Tal_R010177 Tyto alba Tal_R010177 I
Tal_R011103 Tyto alba Tal_R011103 I
TFCP2 Anolis carolinensis ENSACAG00000012289 I
TFCP2 Bos taurus ENSBTAG00000019312 I
TFCP2 Canis familiaris ENSCAFG00000007831 I
TFCP2 Callithrix jacchus ENSCJAG00000017599 I
TFCP2 Cavia porcellus ENSCPOG00000007923 I
tfcp2 Danio rerio ENSDARG00000060306 I
TFCP2 Equus caballus ENSECAG00000020650 I
TFCP2 Echinops telfairi ENSETEG00000010787 I
TFCP2 Felis catus ENSFCAG00000030292 I
TFCP2 Homo sapiens ENSG00000135457 D
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I
TFCP2 Loxodonta africana ENSLAFG00000009123 I
TFCP2 Myotis lucifugus ENSMLUG00000013918 I
TFCP2 Macaca mulatta ENSMMUG00000000152 I
Tfcp2 Mus musculus ENSMUSG00000009733 I
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I
TFCP2 Otolemur garnettii ENSOGAG00000007969 I
TFCP2 Ochotona princeps ENSOPRG00000005747 I
tfcp2 Oryzias latipes ENSORLG00000015644 I
TFCP2 Procavia capensis ENSPCAG00000014181 I
TFCP2 Pan troglodytes ENSPTRG00000004949 I
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I
TFCP2 Tursiops truncatus ENSTTRG00000013836 I
TFCP2 Vicugna pacos ENSVPAG00000007617 I
tfcp2 Xenopus tropicalis XB-GENE-485720 I
tfcp2.L Xenopus laevis XB-GENE-865546 I
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I
TFCP2L1 Bos taurus ENSBTAG00000007765 I
TFCP2L1 Canis familiaris ENSCAFG00000004788 I
TFCP2L1 Equus caballus ENSECAG00000024837 I
TFCP2L1 Felis catus ENSFCAG00000012143 I
TFCP2L1 Homo sapiens ENSG00000115112 D
TFCP2L1 Gallus gallus ENSGALG00000011635 I
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I
TFCP2L1 Microcebus murinus ENSMICG00000007161 I
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I
TFCP2L1 Sus scrofa ENSSSCG00000015732 I
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I
Ubp1 Dipodomys ordii ENSDORG00000010133 I
UBP1 Equus caballus ENSECAG00000018555 I
UBP1 Echinops telfairi ENSETEG00000016510 I
UBP1 Felis catus ENSFCAG00000006123 I
UBP1 Meleagris gallopavo ENSMGAG00000011814 I
UBP1 Procavia capensis ENSPCAG00000008237 I
UBP1 Sorex araneus ENSSARG00000008670 I
UBP1 Sus scrofa ENSSSCG00000011235 I
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I
UBP1 Tursiops truncatus ENSTTRG00000016791 I