Bra029762 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra029762 T268043_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.728 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029762.1-P Myb 80 126
Bra029762.1-P Myb 132 178
Bra029762.1-P Myb 184 229

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28629.m000575 Ricinus communis 28629.m000575 N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
cassava15680.m1 Manihot esculenta cassava15680.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava19207.valid.m1 Manihot esculenta cassava19207.valid.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N 0.000
Cla018692 Citrullus lanatus Cla018692 N 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N 0.000
MDP0000252435 Malus domestica MDP0000252435 N 0.000
MDP0000252746 Malus domestica MDP0000252746 N 0.000
MDP0000506233 Malus domestica MDP0000506233 N 0.000
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
PRUPE_ppa025103mg Prunus persica PRUPE_ppa025103mg N 0.000
SapurV1A.0768s0010 Salix purpurea SapurV1A.0768s0010 N 0.000
TCM_022676 Theobroma cacao TCM_022676 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
VIT_08s0007g02940 Vitis vinifera VIT_08s0007g02940 N 0.000