MLOC_56804 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_56804 T274514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.909 1.000
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.901 0.957
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.901 0.957
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.901 0.957
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.901 0.957
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.899 0.978
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.899 0.978
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.899 0.978
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.891
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.891
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.891
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_56804.1 Myb 70 115
MLOC_56804.2 Myb 70 115

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29711.m000322 Ricinus communis 29711.m000322 I 0.000
29830.m001386 Ricinus communis 29830.m001386 I 0.000
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I 0.000
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.000
BGIOSGA008112 Oryza indica BGIOSGA008112 I 0.000
bHLH11 Vitis vinifera VIT_04s0023g03430 I 0.000
bHLH121 Vitis vinifera VIT_03s0038g01790 I 0.000
bHLH121 Arabidopsis lyrata fgenesh2_kg.3__2204__AT3G19860.1 I 0.000
BHLH121 Arabidopsis thaliana AT3G19860 I 0.000
Bo1g112310 Brassica oleracea Bo1g112310 I 0.000
Bostr.19424s0675 Boechera stricta Bostr.19424s0675 I 0.000
Bra038236 Brassica rapa Bra038236 I 0.000
Cagra.0316s0082 Capsella grandiflora Cagra.0316s0082 I 0.000
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I 0.000
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I 0.000
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.000
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.000
Cla001685 Citrullus lanatus Cla001685 I 0.000
Cla014511 Citrullus lanatus Cla014511 I 0.000
Cucsa.043580 Cucumis sativus Cucsa.043580 I 0.000
Cucsa.169240 Cucumis sativus Cucsa.169240 I 0.000
estExt_fgenesh1_pg.C_1360017 Physcomitrella patens estExt_fgenesh1_pg.C_1360017 I 0.000
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.000
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I 0.000
evm.TU.supercontig_17.155 Carica papaya evm.TU.supercontig_17.155 I 0.000
evm.TU.supercontig_6.255 Carica papaya evm.TU.supercontig_6.255 I 0.000
fgenesh1_pg.scaffold_31000088 Physcomitrella patens fgenesh1_pg.scaffold_31000088 I 0.000
gene07391-v1.0-hybrid Fragaria vesca gene07391-v1.0-hybrid I 0.000
gene14608-v1.0-hybrid Fragaria vesca gene14608-v1.0-hybrid I 0.000
GLYMA07G26910 Glycine max GLYMA07G26910 I 0.000
GLYMA08G15740 Glycine max GLYMA08G15740 I 0.000
GLYMA12G02740 Glycine max GLYMA12G02740 I 0.000
GLYMA15G29630 Glycine max GLYMA15G29630 I 0.000
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I 0.000
GRMZM2G114444 Zea mays GRMZM2G114444 I 0.000
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I 0.000
LPERR02G12290 Leersia perrieri LPERR02G12290 I 0.000
Lus10028456.g Linum usitatissimum Lus10028456.g I 0.000
Lus10041908.g Linum usitatissimum Lus10041908.g I 0.000
MDP0000275844 Malus domestica MDP0000275844 I 0.000
mgf017107m Mimulus guttatus mgf017107m I 0.000
MTR_4g075480 Medicago truncatula MTR_4g075480 I 0.000
OB0197G10010 Oryza brachyantha OB0197G10010 I 0.000
OPUNC02G13570 Oryza punctata OPUNC02G13570 I 0.000
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.000
OS02G0433600 Oryza sativa OS02G0433600 I 0.000
Pavir.Aa02015 Panicum virgatum Pavir.Aa02015 I 0.000
PGSC0003DMG400001594 Solanum tuberosum PGSC0003DMG400001594 I 0.000
PK18401.1 Cannabis sativa PK18401.1 D 0.000
Pm021043 Prunus mume Pm021043 I 0.000
Pm026758 Prunus mume Pm026758 I 0.000
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I 0.000
POPTR_0005s11550 Populus trichocarpa POPTR_0005s11550 I 0.000
POPTR_0009s13220 Populus trichocarpa POPTR_0009s13220 I 0.000
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I 0.000
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I 0.000
SapurV1A.0117s0370 Salix purpurea SapurV1A.0117s0370 I 0.000
SapurV1A.1150s0140 Salix purpurea SapurV1A.1150s0140 I 0.000
Sb03g028030 Sorghum bicolor Sb03g028030 I 0.000
Si017804m.g Setaria italica Si017804m.g I 0.000
Solyc01g111130.2 Solanum lycopersicum Solyc01g111130.2 I 0.000
TCM_000204 Theobroma cacao TCM_000204 I 0.000
TCM_006692 Theobroma cacao TCM_006692 I 0.000
Thhalv10021271m.g Eutrema salsugineum Thhalv10021271m.g I 0.000
Thhalv10023630m.g Eutrema salsugineum Thhalv10023630m.g I 0.000