POPTR_0001s01210 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s01210 T278170_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s01210.1 Myb 40 98

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.741
Bo3g032310 Brassica oleracea Bo3g032310 N 0.741
Bo4g029680 Brassica oleracea Bo4g029680 N 0.741
Bra000046 Brassica rapa Bra000046 N 0.741
Bra005127 Brassica rapa Bra005127 N 0.741
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.701
cassava14644.m1 Manihot esculenta cassava14644.m1 N 0.738
Ca_10636 Cicer arietinum Ca_10636 N 0.791
Ca_22200 Cicer arietinum Ca_22200 N 0.703
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.791
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.678
estExt_gwp_gw1.C_2850022 Physcomitrella patens estExt_gwp_gw1.C_2850022 N 0.737
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.716
evm.TU.supercontig_137.19 Carica papaya evm.TU.supercontig_137.19 N 0.777
e_gw1.301.32.1 Physcomitrella patens e_gw1.301.32.1 N 0.671
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.791
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.678
GT-3B Arabidopsis thaliana AT2G38250 N 0.741
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.703
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.791
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.678
PK23483.1 Cannabis sativa PK23483.1 N 0.677
POPTR_0003s10360 Populus trichocarpa POPTR_0003s10360 N 0.807
SapurV1A.1378s0050 Salix purpurea SapurV1A.1378s0050 N 0.700
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.867
TCM_021682 Theobroma cacao TCM_021682 N 0.678