Ca_14925 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_14925 T283042_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.865 0.950
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.840 0.892
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.840 0.892
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.821 0.921
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.763 0.849
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.693 0.835
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.679 0.734
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.670 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_14925 Myb 38 84
Ca_14925 Myb 90 136
Ca_14925 Myb 142 186

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g081980 Brassica oleracea Bo6g081980 N 0.000
Bra003665 Brassica rapa Bra003665 N 0.000
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N 0.000
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.000
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.000
GRMZM2G023813 Zea mays GRMZM2G023813 N 0.000
GRMZM5G808366 Zea mays GRMZM5G808366 N 0.000
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.000
OB04G37650 Oryza brachyantha OB04G37650 N 0.000
OPUNC04G28180 Oryza punctata OPUNC04G28180 N 0.000
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.000
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.000
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N 0.000
Si021833m.g Setaria italica Si021833m.g N 0.000
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.000
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.000
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N 0.000