Bo5g045190 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g045190 T292404_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.911 0.711
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.895 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g045190.1 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac103 Arabidopsis thaliana AT5G64060 D 0.000
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.000
Bo3g005150 Brassica oleracea Bo3g005150 N 0.000
Bo3g101690 Brassica oleracea Bo3g101690 I 0.000
Bo9g174090 Brassica oleracea Bo9g174090 N 0.000
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.000
Bra006019 Brassica rapa Bra006019 N 0.000
Bra009379 Brassica rapa Bra009379 N 0.000
Bra024263 Brassica rapa Bra024263 I 0.000
Bra028640 Brassica rapa Bra028640 I 0.000
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.000
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.000
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.000
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.000
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.000
NAC082 Arabidopsis thaliana AT5G09330 N 0.000
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.000
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.000
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.000