CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G083347
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G083347
T293219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.907
0.482
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.906
0.482
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.906
0.482
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.906
0.482
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G083347_P01
NAC/NAM
13
148
PPGFRFRPTDEELIVHYLRRRALASPLPAAVDIPDVRILAHDPSDLLPPGFGEQERYFFTCKEAKYVKGRRANRATGAGYWKATGKEKPVAVAVRGVQGQGQGQGVLVGMKRSLVFYRGKPPTGSKTEWVMHEYRL
GRMZM2G083347_P02
NAC/NAM
13
119
PPGFRFRPTDEELIVHYLRRRALASPLPAAVDIPDVRILAHDPSDLLPPECGCSKSRPWHRSSSRNASPPAAAAACHGGGGLLVLMFHRLLIAEKQVAGVVAGSRRK
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
0.000
Phatr3_J49938
Phaeodactylum tricornutum
Phatr3_J49938
N
0.000
Thaps23446
Thalassiosira pseudonana
Thaps23446
N
0.000
Thaps24755
Thalassiosira pseudonana
Thaps24755
N
0.000
Thaps25909
Thalassiosira pseudonana
Thaps25909
N
0.000
Thaps6705
Thalassiosira pseudonana
Thaps6705
N
0.000
Thapsdraft1840
Thalassiosira pseudonana
Thapsdraft1840
N
0.000
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
0.000