CBN13200 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN13200 T301752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.866 0.594
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN13200 Nuclear receptor 1 70

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.896
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.823
CBG04928 Caenorhabditis briggsae CBG04928 I 0.987
CBG04929 Caenorhabditis briggsae CBG04929 I 0.978
CBG09567 Caenorhabditis briggsae CBG09567 I 0.891
CBG16982 Caenorhabditis briggsae CBG16982 I 0.947
CBG19169 Caenorhabditis briggsae CBG19169 I 0.982
CBN00434 Caenorhabditis brenneri CBN00434 I 0.933
CBN03087 Caenorhabditis brenneri CBN03087 I 0.793
CRE05044 Caenorhabditis remanei CRE05044 I 0.753
CRE10693 Caenorhabditis remanei CRE10693 I 0.994
CRE12950 Caenorhabditis remanei CRE12950 I 0.882
CRE13011 Caenorhabditis remanei CRE13011 I 0.959
CRE15097 Caenorhabditis remanei CRE15097 I 0.994
CRE30948 Caenorhabditis remanei CRE30948 I 0.823
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.823
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.823
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.823
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.823
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.756
L892_g2782 Steinernema scapterisci L892_g2782 I 0.785
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.834
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.782
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.783
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.798
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.761
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.777
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.866
nhr-30 Caenorhabditis elegans WBGene00016091 N 0.987
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.785
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.850
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.878
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.775