CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-277
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00022374
T306384_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y94H6A.1
Nuclear receptor
68
137
KHCEVCGNAGATSHYGGTVCGGCKIFFSRTVQSRKGFVCERGGQCPMNAGKRAKCRACRFQLCLKARMSP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036374
Oryza indica
BGIOSGA036374
N
BRADI4G39130
Brachypodium distachyon
BRADI4G39130
N
F775_01850
Aegilops tauschii
F775_01850
N
LPERR12G07400
Leersia perrieri
LPERR12G07400
N
MLOC_55909
Hordeum vulgare
MLOC_55909
N
OB12G17360
Oryza brachyantha
OB12G17360
N
OBART12G08590
Oryza barthii
OBART12G08590
N
OGLUM12G09840
Oryza glumaepatula
OGLUM12G09840
N
OLONG_018459
Oryza longistaminata
OLONG_018459
N
OMERI12G06120
Oryza meridionalis
OMERI12G06120
N
ONIVA12G08260
Oryza nivara
ONIVA12G08260
N
OPUNC12G07790
Oryza punctata
OPUNC12G07790
N
ORGLA12G0080500
Oryza glaberrima
ORGLA12G0080500
N
ORUFI12G09490
Oryza rufipogon
ORUFI12G09490
N
OS12G0279100
Oryza sativa
OS12G0279100
N
Pavir.Cb01041
Panicum virgatum
Pavir.Cb01041
N
Pavir.J05247
Panicum virgatum
Pavir.J05247
N
Traes_5AS_7E3208FD4
Triticum aestivum
Traes_5AS_7E3208FD4
N
Traes_5BS_23717182B
Triticum aestivum
Traes_5BS_23717182B
N
TRIUR3_21570
Triticum urartu
TRIUR3_21570
N