Eucgr.F01779 (Eucalyptus grandis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Eucgr.F01779 T321115_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01779.1 RWP-RK 331 379
Eucgr.F01779.2 RWP-RK 178 226

Links

Other RWP-RK family TFs
Other Eucalyptus grandis TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I
CBG09567 Caenorhabditis briggsae CBG09567 I
CBN01168 Caenorhabditis brenneri CBN01168 I
CJA03481 Caenorhabditis japonica CJA03481 I
CRE08690 Caenorhabditis remanei CRE08690 I
CRE08760 Caenorhabditis remanei CRE08760 I
CRE30948 Caenorhabditis remanei CRE30948 I
HCOI00483700 Haemonchus contortus HCOI00483700 I
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I
MhA1_Contig1462.frz3.gene15 Meloidogyne hapla MhA1_Contig1462.frz3.gene15 I
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I
nhr-130 Caenorhabditis elegans WBGene00003720 I
nhr-232 Caenorhabditis elegans WBGene00012494 D
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I