CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Gorai.008G041100 *(Gossypium raimondii)* RWP-RK
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02042 (RWP-RK)	IPR003035	Gorai.008G041100	T321160_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NLP4 M07248_2.00	Arabidopsis thaliana	NNHNNBTGCTGYHNN	NNDRCAGCAVNNDNN	Dap-seq OMalley et al.(2016) AtNLP4_col_b	0.918	0.918
NLP7 M07251_2.00	Arabidopsis thaliana	WNDTGNCYYTTSRDD	HHYSAARRGNCAHNW	Dap-seq OMalley et al.(2016) NLP7_col_a	0.878	0.878
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Gorai.008G041100.1	RWP-RK	631	679	TISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV
Gorai.008G041100.2	RWP-RK	631	675	TISLQVLRQYFAGSLKDAAKSIGGRKIFHLYLEASHSFFTLCSTK

Links
Other RWP-RK family TFs
Other *Gossypium raimondii* TFs