AWRI1499_3752 (Brettanomyces bruxellensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AWRI1499_3752 T326504_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.561 0.725
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.561 0.725
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.561 0.681
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.561 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EIF46351 Sox 15 83

Links

Other Sox family TFs
Other Brettanomyces bruxellensis TFs

336 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N
BGIOSGA006672 Oryza indica BGIOSGA006672 N
BGIOSGA018453 Oryza indica BGIOSGA018453 N
BGIOSGA021177 Oryza indica BGIOSGA021177 N
LPERR01G04800 Leersia perrieri LPERR01G04800 N
Lus10035456.g Linum usitatissimum Lus10035456.g N
MLOC_78558 Hordeum vulgare MLOC_78558 N
OB01G24420 Oryza brachyantha OB01G24420 N
OBART12G09450 Oryza barthii OBART12G09450 N
OGLUM06G17330 Oryza glumaepatula OGLUM06G17330 N
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N
OLONG_012664 Oryza longistaminata OLONG_012664 N
OLONG_018855 Oryza longistaminata OLONG_018855 N
OMERI06G17150 Oryza meridionalis OMERI06G17150 N
OMERI06G17270 Oryza meridionalis OMERI06G17270 N
ONIVA06G15740 Oryza nivara ONIVA06G15740 N
ONIVA06G19160 Oryza nivara ONIVA06G19160 N
ONIVA12G01580 Oryza nivara ONIVA12G01580 N
OPUNC06G14680 Oryza punctata OPUNC06G14680 N
OPUNC06G14730 Oryza punctata OPUNC06G14730 N
OPUNC06G14740 Oryza punctata OPUNC06G14740 N
OPUNC12G08600 Oryza punctata OPUNC12G08600 N
ORGLA06G0135200 Oryza glaberrima ORGLA06G0135200 N
ORGLA06G0135300 Oryza glaberrima ORGLA06G0135300 N
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N
ORUFI06G17170 Oryza rufipogon ORUFI06G17170 N
ORUFI06G17190 Oryza rufipogon ORUFI06G17190 N
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N
OS06G0504100 Oryza sativa OS06G0504100 N
OS12G0407000 Oryza sativa OS12G0407000 N
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I