swsn-3 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00022182 T333280_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Y71H2AM.17 Sox 26 94

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N 0.427
AAH41216 Xenopus laevis AAH41216 N 0.451
AALB002196 Anopheles albimanus AALB002196 N 0.000
AARA006951 Anopheles arabiensis AARA006951 N 0.000
AATE020748 Anopheles atroparvus AATE020748 N 0.000
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.441
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.610
ACEP21543 Atta cephalotes ACEP21543 N 0.457
ACHR000824 Anopheles christyi ACHR000824 N 0.000
ACOM023536 Anopheles coluzzii ACOM023536 N 0.000
ACUA002517 Anopheles culicifacies ACUA002517 N 0.000
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.454
ADAC004863 Anopheles darlingi ADAC004863 N 0.000
ADIR010513 Anopheles dirus ADIR010513 N 0.000
AEPI007457 Anopheles epiroticus AEPI007457 N 0.000
AFAF004631 Anopheles farauti AFAF004631 N 0.000
AFUN008276 Anopheles funestus AFUN008276 N 0.000
AGAP001994 Anopheles gambiae AGAP001994 N 0.000
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.505
AMAM007470 Anopheles maculatus AMAM007470 N 0.000
AMEC010472 Anopheles melas AMEC010472 N 0.000
AMEM015770 Anopheles merus AMEM015770 N 0.000
AMIN003302 Anopheles minimus AMIN003302 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.610
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.610
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.610
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.610
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.000
ASIM_0000973401 Anisakis simplex ASIM_0000973401 N 0.000
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.505
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.505
ASIS021704 Anopheles sinensis ASIS021704 N 0.000
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.000
ASU_02248 Ascaris suum ASU_02248 N 0.505
A_05744 Schistosoma haematobium A_05744 N 0.000
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.421
Bm12451 Brugia malayi Bm12451 N 0.444
Bm7076 Brugia malayi Bm7076 N 0.530
CapteG156119 Capitella teleta CapteG156119 N 0.444
CBG09815 Caenorhabditis briggsae CBG09815 N 0.728
CBN09141 Caenorhabditis brenneri CBN09141 N 0.690
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.457
CJA12494 Caenorhabditis japonica CJA12494 N 0.591
CLEC001104 Cimex lectularius CLEC001104 N 0.444
CLEC009203 Cimex lectularius CLEC009203 N 0.436
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.427
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.427
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.427
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.427
CRE25200 Caenorhabditis remanei CRE25200 N 0.690
csin103376 Clonorchis sinensis csin103376 N 0.000
D915_15883 Fasciola hepatica D915_15883 N 0.000
D918_01415 Trichuris suis D918_01415 N 0.000
dalao Drosophila melanogaster FBgn0030093 N 0.000
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.448
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.537
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.000
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.530
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.000
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.000
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.444
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.000
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.000
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.417
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.000
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.442
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.445
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.442
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.442
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.442
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.426
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.442
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.551
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.000
GB50847 Apis mellifera GB50847 N 0.457
GD16931 Drosophila simulans FBgn0188511 N 0.000
GE15824 Drosophila yakuba FBgn0233388 N 0.000
GF19131 Drosophila ananassae FBgn0096142 N 0.000
GG18291 Drosophila erecta FBgn0110507 N 0.000
GH12291 Drosophila grimshawi FBgn0119770 N 0.000
GK25765 Drosophila willistoni FBgn0227724 N 0.000
GL26801 Drosophila persimilis FBgn0164382 N 0.000
GM13722 Drosophila sechellia FBgn0168653 N 0.000
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.463
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.467
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.610
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.000
HelroG188630 Helobdella robusta HelroG188630 N 0.451
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.457
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.433
HMEL010720 Heliconius melpomene HMEL010720 N 0.453
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.610
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.610
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.457
ISCW021016 Ixodes scapularis ISCW021016 N 0.436
KGM_12870 Danaus plexippus KGM_12870 N 0.453
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.456
L798_00593 Zootermopsis nevadensis L798_00593 N 0.457
L889_g3706 Steinernema feltiae L889_g3706 N 0.420
L892_g30100 Steinernema scapterisci L892_g30100 N 0.456
L898_g375 Steinernema monticolum L898_g375 N 0.458
LCUP013669 Lucilia cuprina LCUP013669 N 0.000
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.457
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.442
LOAG_01279 Loa loa LOAG_01279 N 0.530
LotgiG111061 Lottia gigantea LotgiG111061 N 0.444
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.528
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.000
MDOA009352 Musca domestica MDOA009352 N 0.000
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.530
Minc14081 Meloidogyne incognita Minc14081 N 0.528
ML45008a Mnemiopsis leidyi ML45008a N 0.000
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.530
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.530
NECAME_16117 Necator americanus NECAME_16117 N 0.610
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.442
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.530
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.530
NV11999 Nasonia vitripennis NV11999 N 0.457
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.610
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.610
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.530
PEQ_0000805501 Parascaris equorum PEQ_0000805501 N 0.000
PPA02543 Pristionchus pacificus PPA02543 N 0.541
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.450
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.000
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.483
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.541
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.000
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.000
SMAR004982 Strigamia maritima SMAR004982 N 0.437
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.439
smarce1 Oryzias latipes ENSORLG00000018629 N 0.442
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.442
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.442
Smp_154640 Schistosoma mansoni Smp_154640 N 0.000
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.000
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.000
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.505
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.528
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.000
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.000
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.610
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N 0.000
T265_02983 Opisthorchis viverrini T265_02983 N 0.000
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.000
TC007745 Tribolium castaneum TC007745 N 0.457
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.530
TCNE_0001003101 Toxocara canis TCNE_0001003101 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.610
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.000
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.430
TsM_000047400 Taenia solium TsM_000047400 N 0.000
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.000
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.530
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.530
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.457