GK19893 (Drosophila willistoni)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 FBgn0221891 T340711_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
org-1
M03988_2.00 		Drosophila melanogaster
DRGTGTBAD
HTVACACYH		 SELEX
Nitta et al.(2015)
org-1_1 		0.920 0.995
org-1
M03989_2.00 		Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA		 SELEX
Nitta et al.(2015)
org-1_2 		0.920 0.995
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.739 0.725
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.739 0.725
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.739 0.725
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.739 0.725
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.739 0.725
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.739 0.725
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.739 0.725
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.739 0.725
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.739 0.725
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0249036 T-box 228 415

Links

Other T-box family TFs
Other Drosophila willistoni TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
Bo2g012170 Brassica oleracea Bo2g012170 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bra008740 Brassica rapa Bra008740 I
Bra025311 Brassica rapa Bra025311 I
Bra025589 Brassica rapa Bra025589 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I
Cla011528 Citrullus lanatus Cla011528 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I
GL1 Arabidopsis thaliana AT3G27920 I
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I
MDP0000164048 Malus domestica MDP0000164048 I
MDP0000537324 Malus domestica MDP0000537324 I
MDP0000578193 Malus domestica MDP0000578193 I
MDP0000650225 Malus domestica MDP0000650225 I
MYB23 Arabidopsis thaliana AT5G40330 D
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
Pm006678 Prunus mume Pm006678 I
Pm024725 Prunus mume Pm024725 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
TCM_010360 Theobroma cacao TCM_010360 I
TCM_012057 Theobroma cacao TCM_012057 I
TCM_016886 Theobroma cacao TCM_016886 I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
WER Arabidopsis thaliana AT5G14750 D