CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0001803801
(
Protopolystoma xenopodis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
PXEA_0001803801
T341894_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0001803801-mRNA-1
T-box
1
61
MHKYQPRFHLVRASDIARLPYSTFHSYVFKETQFIAVTAYQNEKITQLKIDHNPFAKGFRD
Links
Other
T-box
family TFs
Other
Protopolystoma xenopodis
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AABR07030543.1
Rattus norvegicus
ENSRNOG00000051634
N
AABR07040430.1
Rattus norvegicus
ENSRNOG00000056486
N
AABR07040480.1
Rattus norvegicus
ENSRNOG00000057407
N
AABR07041586.2
Rattus norvegicus
ENSRNOG00000052769
N
AABR07045786.1
Rattus norvegicus
ENSRNOG00000055923
N
AC127605.1
Rattus norvegicus
ENSRNOG00000033156
N
A_00070
Schistosoma haematobium
A_00070
N
ECANG7_07075
Echinococcus canadensis
ECANG7_07075
N
EmuJ_000941400
Echinococcus multilocularis
EmuJ_000941400
N
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
hmgb3b
Danio rerio
ENSDARG00000006408
N
HmN_000761000
Hymenolepis microstoma
HmN_000761000
N
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
Smp_100090
Schistosoma mansoni
Smp_100090
N
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
TASK_0000795701
Taenia asiatica
TASK_0000795701
N
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
TsM_000746700
Taenia solium
TsM_000746700
N