LDEC008856 (Leptinotarsa decemlineata)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 LDEC008856 T343213_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.922 0.922
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.922 0.922
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.922 0.922
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.922 0.922
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.922 0.922
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.922 0.922
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.922 0.922
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.922 0.922
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.922 0.922
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.922 0.922
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.814 0.814
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.814 0.814
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC008856-PA TBP 41 123
LDEC008856-PA TBP 131 214

Links

Other TBP family TFs
Other Leptinotarsa decemlineata TFs

777 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N
AABR07040480.1 Rattus norvegicus ENSRNOG00000057407 N
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N
A_00070 Schistosoma haematobium A_00070 N
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N
hmg1/2 Ciona intestinalis ENSCING00000004075 N
hmgb3b Danio rerio ENSDARG00000006408 N
HmN_000761000 Hymenolepis microstoma HmN_000761000 N
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N
LOC681067 Rattus norvegicus ENSRNOG00000057013 N
LOC688583 Rattus norvegicus ENSRNOG00000050910 N
LOC691030 Rattus norvegicus ENSRNOG00000057926 N
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N
Smp_100090 Schistosoma mansoni Smp_100090 N
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N
TASK_0000795701 Taenia asiatica TASK_0000795701 N
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N
TsM_000746700 Taenia solium TsM_000746700 N