Eucgr.G02354 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.G02354 T344802_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.921 0.319
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.921 0.319
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.921 0.319
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.919 0.312
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02354.1 TCP 31 110
Eucgr.G02354.1 TCP 97 154

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N
Bo2g166280 Brassica oleracea Bo2g166280 N
Bo3g101220 Brassica oleracea Bo3g101220 N
Bo9g018140 Brassica oleracea Bo9g018140 N
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N
Bra024306 Brassica rapa Bra024306 N
Bra031915 Brassica rapa Bra031915 N
Bra037779 Brassica rapa Bra037779 N
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N
Carubv10027198m.g Capsella rubella Carubv10027198m.g N
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N
Ca_05227 Cicer arietinum Ca_05227 N
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N
Cla009592 Citrullus lanatus Cla009592 N
Cucsa.345830 Cucumis sativus Cucsa.345830 N
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N
GLYMA05G24910 Glycine max GLYMA05G24910 N
GLYMA08G08010 Glycine max GLYMA08G08010 N
GLYMA15G05690 Glycine max GLYMA15G05690 N
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N
Lus10000206.g Linum usitatissimum Lus10000206.g N
Lus10010747.g Linum usitatissimum Lus10010747.g N
Lus10035647.g Linum usitatissimum Lus10035647.g N
Lus10035648.g Linum usitatissimum Lus10035648.g N
MDP0000240094 Malus domestica MDP0000240094 N
MDP0000250487 Malus domestica MDP0000250487 N
MTR_4g094302 Medicago truncatula MTR_4g094302 N
NAC104 Arabidopsis thaliana AT5G64530 N
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N
PGSC0003DMG400005501 Solanum tuberosum PGSC0003DMG400005501 N
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N
PK12901.1 Cannabis sativa PK12901.1 N
Pm004078 Prunus mume Pm004078 N
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I
SapurV1A.0869s0210 Salix purpurea SapurV1A.0869s0210 I
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N
Solyc10g047060.1 Solanum lycopersicum Solyc10g047060.1 N
TCM_007543 Theobroma cacao TCM_007543 I
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N