VIT_02s0025g04910 (Vitis vinifera)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 VIT_02s0025g04910 T351363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.767 0.767
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_02s0025g04910.t01 WRC 111 153

Links

Other WRC family TFs
Other Vitis vinifera TFs

591 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000736 Ricinus communis 29814.m000736 I 0.000
30170.m013927 Ricinus communis 30170.m013927 I 0.000
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.000
BGIOSGA000003 Oryza indica BGIOSGA000003 N 0.000
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.000
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.000
Ca_01522 Cicer arietinum Ca_01522 I 0.000
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.000
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.000
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.000
Cla004431 Citrullus lanatus Cla004431 I 0.000
Cla020946 Citrullus lanatus Cla020946 I 0.000
Cla021015 Citrullus lanatus Cla021015 I 0.000
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.000
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.000
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.000
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.000
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.000
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.000
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.000
LPERR01G40230 Leersia perrieri LPERR01G40230 I 0.000
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.000
Lus10010055.g Linum usitatissimum Lus10010055.g I 0.000
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.000
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.000
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.000
MDP0000298689 Malus domestica MDP0000298689 I 0.000
mgf020432m Mimulus guttatus mgf020432m I 0.000
mgf023922m Mimulus guttatus mgf023922m I 0.000
OB01G55080 Oryza brachyantha OB01G55080 N 0.000
OBART01G45880 Oryza barthii OBART01G45880 N 0.000
OGLUM01G50230 Oryza glumaepatula OGLUM01G50230 N 0.000
OLONG_011153 Oryza longistaminata OLONG_011153 N 0.000
OPUNC01G44800 Oryza punctata OPUNC01G44800 N 0.000
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.000
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.000
ORGLA01G0396300 Oryza glaberrima ORGLA01G0396300 N 0.000
ORUFI01G49370 Oryza rufipogon ORUFI01G49370 N 0.000
OS01G0977300 Oryza sativa OS01G0977300 N 0.000
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I 0.000
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.000
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.000
PK01153.1 Cannabis sativa PK01153.1 I 0.000
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.000
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.000
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.000
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.000
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.000
Sb0088s002210 Sorghum bicolor Sb0088s002210 N 0.000
Si022959m.g Setaria italica Si022959m.g I 0.000
TCM_007138 Theobroma cacao TCM_007138 I 0.000
TCM_042474 Theobroma cacao TCM_042474 I 0.000
Traes_4AS_A79A68739 Triticum aestivum Traes_4AS_A79A68739 N 0.000
Traes_4BL_545A5716E Triticum aestivum Traes_4BL_545A5716E I 0.000
Traes_4DL_D41CB81EA Triticum aestivum Traes_4DL_D41CB81EA I 0.000
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.000