WRKY62 (Oryza indica)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 BGIOSGA029757 T352045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.858 0.831
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.858 0.831
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.858 0.831
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.858 0.831
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.856 0.814
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.854 0.847
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.854 0.847
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.854 0.847
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.854 0.847
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.854 0.847
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.813 0.661
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.813 0.661
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.811 0.661
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.811 0.661
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.809 0.644
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.809 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA029757-PA WRKY 144 202

Links

Other WRKY family TFs
Other Oryza indica TFs

716 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006322 Ricinus communis 30169.m006322 I
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I
Aquca_005_00496 Aquilegia coerulea Aquca_005_00496 I
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I
ATMYB13 Arabidopsis thaliana AT1G06180 D
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I
ATMYB72 Arabidopsis thaliana AT1G56160 I
ATMYB72 Arabidopsis lyrata fgenesh2_kg.1__4638__AT1G56160.1 I
BGIOSGA005798 Oryza indica BGIOSGA005798 I
BGIOSGA014440 Oryza indica BGIOSGA014440 I
BGIOSGA031688 Oryza indica BGIOSGA031688 I
Bo1g102190 Brassica oleracea Bo1g102190 I
Bo3g025100 Brassica oleracea Bo3g025100 I
Bo3g185830 Brassica oleracea Bo3g185830 I
Bo4g176020 Brassica oleracea Bo4g176020 I
Bo4g176030 Brassica oleracea Bo4g176030 I
Bo6g077600 Brassica oleracea Bo6g077600 I
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I
Bostr.6758s0073 Boechera stricta Bostr.6758s0073 I
Bra018267 Brassica rapa Bra018267 I
Bra021708 Brassica rapa Bra021708 I
Bra023742 Brassica rapa Bra023742 I
Bra030812 Brassica rapa Bra030812 I
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I
Cagra.0998s0005 Capsella grandiflora Cagra.0998s0005 I
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I
Carubv10003283m.g Capsella rubella Carubv10003283m.g I
Carubv10023905m.g Capsella rubella Carubv10023905m.g I
cassava14699.m1 Manihot esculenta cassava14699.m1 I
cassava26895.m1 Manihot esculenta cassava26895.m1 N
cassava47180.m1 Manihot esculenta cassava47180.m1 I
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I
chr4.LjT12N18.150.nd Lotus japonicus chr4.LjT12N18.150.nd I
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I
Cla006077 Citrullus lanatus Cla006077 I
Cla007705 Citrullus lanatus Cla007705 I
Cla013669 Citrullus lanatus Cla013669 I
Cla019747 Citrullus lanatus Cla019747 I
Cucsa.053600 Cucumis sativus Cucsa.053600 I
Cucsa.126220 Cucumis sativus Cucsa.126220 I
Cucsa.383620 Cucumis sativus Cucsa.383620 I
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I
evm.TU.supercontig_107.48 Carica papaya evm.TU.supercontig_107.48 I
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I
F775_04867 Aegilops tauschii F775_04867 I
F775_14744 Aegilops tauschii F775_14744 I
F775_14942 Aegilops tauschii F775_14942 I
F775_18231 Aegilops tauschii F775_18231 I
F775_20725 Aegilops tauschii F775_20725 I
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I
gene30024-v1.0-hybrid Fragaria vesca gene30024-v1.0-hybrid I
GLYMA01G06192 Glycine max GLYMA01G06192 I
GLYMA03G31980 Glycine max GLYMA03G31980 I
GLYMA06G45520 Glycine max GLYMA06G45520 N
GLYMA06G45531 Glycine max GLYMA06G45531 N
GLYMA06G45554 Glycine max GLYMA06G45554 I
GLYMA10G32410 Glycine max GLYMA10G32410 I
GLYMA12G11490 Glycine max GLYMA12G11490 N
GLYMA13G37903 Glycine max GLYMA13G37903 I
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I
GRMZM2G038722 Zea mays GRMZM2G038722 I
GRMZM2G044824 Zea mays GRMZM2G044824 I
GRMZM2G097636 Zea mays GRMZM2G097636 I
GRMZM2G097638 Zea mays GRMZM2G097638 I
GRMZM2G102790 Zea mays GRMZM2G102790 I
GRMZM2G147346 Zea mays GRMZM2G147346 I
GRMZM5G833253 Zea mays GRMZM5G833253 I
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I
GSMUA_Achr4G19030_001 Musa acuminata GSMUA_Achr4G19030_001 I
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I
LPERR02G23410 Leersia perrieri LPERR02G23410 I
LPERR07G15930 Leersia perrieri LPERR07G15930 I
Lus10003557.g Linum usitatissimum Lus10003557.g I
Lus10011820.g Linum usitatissimum Lus10011820.g I
Lus10021185.g Linum usitatissimum Lus10021185.g I
Lus10021871.g Linum usitatissimum Lus10021871.g I
Lus10022021.g Linum usitatissimum Lus10022021.g I
Lus10033889.g Linum usitatissimum Lus10033889.g I
Lus10041145.g Linum usitatissimum Lus10041145.g I
Lus10042561.g Linum usitatissimum Lus10042561.g I
MDP0000145050 Malus domestica MDP0000145050 I
MDP0000148689 Malus domestica MDP0000148689 N
MDP0000897594 Malus domestica MDP0000897594 I
mgf011672m Mimulus guttatus mgf011672m I
MLOC_53640 Hordeum vulgare MLOC_53640 I
MLOC_71418 Hordeum vulgare MLOC_71418 I
MYB14 Arabidopsis thaliana AT2G31180 I
OB0039G10010 Oryza brachyantha OB0039G10010 I
OB02G35920 Oryza brachyantha OB02G35920 I
OB04G30570 Oryza brachyantha OB04G30570 I
OB07G24240 Oryza brachyantha OB07G24240 I
OBART02G28790 Oryza barthii OBART02G28790 I
OBART04G23680 Oryza barthii OBART04G23680 I
OBART07G18450 Oryza barthii OBART07G18450 I
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I
OLONG_022853 Oryza longistaminata OLONG_022853 I
OMERI02G27850 Oryza meridionalis OMERI02G27850 I
OMERI04G19570 Oryza meridionalis OMERI04G19570 I
OMERI07G15370 Oryza meridionalis OMERI07G15370 I
OMERI10G10120 Oryza meridionalis OMERI10G10120 I
ONIVA02G31530 Oryza nivara ONIVA02G31530 I
ONIVA04G19740 Oryza nivara ONIVA04G19740 I
ONIVA06G20400 Oryza nivara ONIVA06G20400 I
OPUNC02G26430 Oryza punctata OPUNC02G26430 I
OPUNC04G21230 Oryza punctata OPUNC04G21230 I
OPUNC07G17410 Oryza punctata OPUNC07G17410 I
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I
OS02G0695200 Oryza sativa OS02G0695200 I
OS04G0594100 Oryza sativa OS04G0594100 I
OS07G0558100 Oryza sativa OS07G0558100 I
OS10G0478300 Oryza sativa OS10G0478300 I
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I
Pavir.J09313 Panicum virgatum Pavir.J09313 I
Pavir.J10932 Panicum virgatum Pavir.J10932 I
Pavir.J23197 Panicum virgatum Pavir.J23197 I
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I
PK08038.1 Cannabis sativa PK08038.1 I
PK20358.1 Cannabis sativa PK20358.1 I
PK29337.1 Cannabis sativa PK29337.1 I
Pm019588 Prunus mume Pm019588 I
Pm020596 Prunus mume Pm020596 I
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I
Sb01g019270 Sorghum bicolor Sb01g019270 I
Sb04g031110 Sorghum bicolor Sb04g031110 I
Sb06g027180 Sorghum bicolor Sb06g027180 I
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I
Si006790m.g Setaria italica Si006790m.g I
Si010384m.g Setaria italica Si010384m.g I
Si017704m.g Setaria italica Si017704m.g I
Si040527m.g Setaria italica Si040527m.g I
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I
TCM_001102 Theobroma cacao TCM_001102 I
TCM_004046 Theobroma cacao TCM_004046 I
TCM_007868 Theobroma cacao TCM_007868 I
TCM_020889 Theobroma cacao TCM_020889 I
Thhalv10012163m.g Eutrema salsugineum Thhalv10012163m.g I
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I
Traes_7DS_91CCCF6DB Triticum aestivum Traes_7DS_91CCCF6DB I
Traes_7DS_91CCCF6DB1 Triticum aestivum Traes_7DS_91CCCF6DB1 I
TRIUR3_14330 Triticum urartu TRIUR3_14330 I
TRIUR3_17294 Triticum urartu TRIUR3_17294 I
TRIUR3_18702 Triticum urartu TRIUR3_18702 I
TRIUR3_31731 Triticum urartu TRIUR3_31731 I
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I