cassava14699.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava14699.m1 T284013_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.691 0.710
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.691 0.710
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.661 0.677
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.661 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14699.m1 Myb 14 61
cassava14699.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.775
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.773
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.770
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.767
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.764
TCM_007868 Theobroma cacao TCM_007868 I 0.761
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.756
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.756
MDP0000148689 Malus domestica MDP0000148689 N 0.741
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.733
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.729
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.723
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.723
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.720
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.719
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.718
Pm015303 Prunus mume Pm015303 I 0.714
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.710
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.710
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.710
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.708
Solyc07g054960.1 Solanum lycopersicum Solyc07g054960.1 I 0.708
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.706
mgf022141m Mimulus guttatus mgf022141m N 0.706
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.706
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.706
mgf019234m Mimulus guttatus mgf019234m N 0.704
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.701
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.699
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.697
mgf011672m Mimulus guttatus mgf011672m I 0.694
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.693
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.693
PGSC0003DMG400046667 Solanum tuberosum PGSC0003DMG400046667 N 0.692
MYB58 Arabidopsis thaliana AT1G16490 D 0.691
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.690
PK20358.1 Cannabis sativa PK20358.1 I 0.690
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.689
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.689
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.689
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.688
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.688
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.687
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.687
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.687
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.686
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.685
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.684
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.684
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.684
OB04G30570 Oryza brachyantha OB04G30570 I 0.684
OBART04G23680 Oryza barthii OBART04G23680 I 0.684
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.684
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.684
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.684
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.684
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.684
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.684
OS04G0594100 Oryza sativa OS04G0594100 I 0.684
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.684
Si010384m.g Setaria italica Si010384m.g I 0.684
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.684
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.684
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.684
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.683
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.683
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.683
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.682
Bo8g105490 Brassica oleracea Bo8g105490 I 0.682
Bra026720 Brassica rapa Bra026720 I 0.682
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.682
OBART02G28790 Oryza barthii OBART02G28790 I 0.682
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.682
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.682
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.682
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.682
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.682
OS02G0695200 Oryza sativa OS02G0695200 I 0.682
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.682
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.682
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.682
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.682
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.681
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.681
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.680
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.680
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N 0.680
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.679
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.679
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.679
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.679
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.679
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.678
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.678
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.678
Bo6g122640 Brassica oleracea Bo6g122640 I 0.677
PGSC0003DMG400047175 Solanum tuberosum PGSC0003DMG400047175 N 0.677
Bo3g081700 Brassica oleracea Bo3g081700 I 0.676
Bo7g040780 Brassica oleracea Bo7g040780 I 0.676
Bra001907 Brassica rapa Bra001907 I 0.676
Bra014929 Brassica rapa Bra014929 I 0.676
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.676
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.676
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.676
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.676
Cla021845 Citrullus lanatus Cla021845 I 0.674
30169.m006322 Ricinus communis 30169.m006322 I 0.674
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.673
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.673
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.673
OB02G35920 Oryza brachyantha OB02G35920 I 0.673
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.673
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.673
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.673
Si017704m.g Setaria italica Si017704m.g I 0.673
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.673
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.673
PK08038.1 Cannabis sativa PK08038.1 I 0.673
Cla019747 Citrullus lanatus Cla019747 I 0.672
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.672
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.672
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.671
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.671
Ca_12130 Cicer arietinum Ca_12130 I 0.671
F775_18231 Aegilops tauschii F775_18231 I 0.670
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.670
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.670
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.670
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.670
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.670
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.670
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.669
Si040527m.g Setaria italica Si040527m.g I 0.669
MDP0000145050 Malus domestica MDP0000145050 I 0.669
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.669
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.669
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.668
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.668
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.668
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.668
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.668
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.668
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.668
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.668
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.668
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.668
TCM_020889 Theobroma cacao TCM_020889 I 0.667
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.666
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.666
OS10G0478300 Oryza sativa OS10G0478300 I 0.666
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.665
F775_14744 Aegilops tauschii F775_14744 I 0.665
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.665
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.665
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.665
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.665
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.665
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.665
Bo6g081140 Brassica oleracea Bo6g081140 I 0.664
Bra003619 Brassica rapa Bra003619 I 0.664
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.664
Bo3g065150 Brassica oleracea Bo3g065150 I 0.663
MTR_0063s0090 Medicago truncatula MTR_0063s0090 N 0.663
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.662
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.662
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.662
PK03488.1 Cannabis sativa PK03488.1 I 0.662
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.662
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.661
AtMYB10 Arabidopsis lyrata fgenesh2_kg.3__1346__AT3G12820.1 I 0.661
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.661
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.661
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.661
Cagra.5641s0047 Capsella grandiflora Cagra.5641s0047 I 0.661
Carubv10016289m.g Capsella rubella Carubv10016289m.g I 0.661
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I 0.661