Eucgr.A01767 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.A01767 T286732_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.671 0.688
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.671 0.688
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.662 0.699
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.662 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A01767.1 Myb 14 61
Eucgr.A01767.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.810
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.786
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.762
MDP0000155426 Malus domestica MDP0000155426 I 0.747
TCM_007865 Theobroma cacao TCM_007865 I 0.747
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.741
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.740
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.740
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.738
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.736
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.735
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.733
MDP0000407613 Malus domestica MDP0000407613 N 0.733
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.733
PK24260.1 Cannabis sativa PK24260.1 N 0.732
Pm015302 Prunus mume Pm015302 N 0.726
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.726
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.723
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.720
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.719
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.718
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.718
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.715
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.710
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.707
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.705
Bra040181 Brassica rapa Bra040181 I 0.705
Bo1g017860 Brassica oleracea Bo1g017860 I 0.705
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.705
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.703
Pm015547 Prunus mume Pm015547 I 0.703
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.703
Pm030488 Prunus mume Pm030488 I 0.703
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.701
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.701
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.701
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.697
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.693
Pm028882 Prunus mume Pm028882 I 0.693
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.693
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.692
OS04G0594100 Oryza sativa OS04G0594100 I 0.692
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.692
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.692
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.692
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.692
OBART04G23680 Oryza barthii OBART04G23680 I 0.692
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.692
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.692
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.692
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.692
OS02G0695200 Oryza sativa OS02G0695200 I 0.690
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.690
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.690
OBART02G28790 Oryza barthii OBART02G28790 I 0.690
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.690
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.690
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.690
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.690
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.690
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.690
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.688
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.688
Si010384m.g Setaria italica Si010384m.g I 0.688
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.687
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.683
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.683
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.681
Bra021033 Brassica rapa Bra021033 I 0.681
OB02G35920 Oryza brachyantha OB02G35920 I 0.681
PRUPE_ppa017235mg Prunus persica PRUPE_ppa017235mg I 0.681
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.681
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.681
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.680
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.679
PK20358.1 Cannabis sativa PK20358.1 I 0.679
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.679
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.678
TCM_020889 Theobroma cacao TCM_020889 I 0.678
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.677
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.677
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.677
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.676
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.676
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.674
PK03488.1 Cannabis sativa PK03488.1 I 0.672
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.672
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.671
MYB39 Arabidopsis thaliana AT4G17785 D 0.671
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.670
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.670
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.670
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.670
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.670
Bo6g081140 Brassica oleracea Bo6g081140 I 0.670
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.670
Bra003619 Brassica rapa Bra003619 I 0.670
F775_14744 Aegilops tauschii F775_14744 I 0.669
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.669
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.669
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.669
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.669
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.669
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.668
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.668
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.668
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.668
PK08038.1 Cannabis sativa PK08038.1 I 0.667
30169.m006322 Ricinus communis 30169.m006322 I 0.667
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.667
Ca_22597 Cicer arietinum Ca_22597 N 0.667
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.667
TCM_030020 Theobroma cacao TCM_030020 I 0.666
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.666
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.666
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.666
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.666
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.666
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.666
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.665
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.664
MDP0000131822 Malus domestica MDP0000131822 I 0.663
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.663
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.662
OB04G30570 Oryza brachyantha OB04G30570 I 0.662
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N 0.662
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.662
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.661
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.661
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.661
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.661
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.661
TCM_033016 Theobroma cacao TCM_033016 N 0.661